1 citations · 1 across the 2 of their papers we have counts for
4 papers
Sequence-based study of two related proteins with different folding behaviors
Giorgio Favrin, Anders Irbäck, Stefan Wallin
ZSPA-1 is an engineered protein that binds to its parent, the three-helix-bundle Z domain of staphylococcal protein A. Uncomplexed ZSPA-1 shows a reduced helix content and a meltin…
Folding thermodynamics of three beta-sheet peptides: A model study
Anders Irbäck, Fredrik Sjunnesson
We study the folding thermodynamics of a beta-hairpin and two three-stranded beta-sheet peptides using a simplified sequence-based all-atom model, in which folding is driven mainly…
Enumerating Designing Sequences in the HP Model
Anders Irbäck, Carl Troein
The hydrophobic/polar HP model on the square lattice has been widely used to investigate basics of protein folding. In the cases where all designing sequences (sequences with uniqu…
Folding of a Small Helical Protein Using Hydrogen Bonds and Hydrophobicity Forces
Giorgio Favrin, Anders Irbäck, Stefan Wallin
A reduced protein model with five to six atoms per amino acid and five amino acid types is developed and tested on a three-helix-bundle protein, a 46-amino acid fragment from staph…