124 citations · 971 across the 28 of their papers we have counts for
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Identification of Amino Acid Sequences with Good Folding Properties in an Off-Lattice Model
Anders Irbäck, Carsten Peterson, Frank Potthast
Folding properties of a two-dimensional toy protein model containing only two amino-acid types, hydrophobic and hydrophilic, respectively, are analyzed. An efficient Monte Carlo pr…
Binary Assignments of Amino Acids from Pattern Conservation
Anders Irbäck, Frank Potthast
We develop a simple optimization procedure for assigning binary values to the amino acids. The binary values are determined by a maximization of the degree of pattern conservation…
Evidence for Non-Random Hydrophobicity Structures in Protein Chains
Anders Irbäck, Carsten Peterson, Frank Potthast
The question of whether proteins originate from random sequences of amino acids is addressed. A statistical analysis is performed in terms of blocked and random walk values formed…
Sequence Dependence in an Off-Lattice Model for Protein Folding
Anders Irbäck, Frank Potthast
See chem-ph/9505003.
Studies of an Off-Lattice Model for Protein Folding: Sequence Dependence and Improved Sampling at Finite Temperature
Anders Irbäck, Frank Potthast
We study the thermodynamic behavior of a simple off-lattice model for protein folding. The model is two-dimensional and has two different ``amino acids''. Using numerical simulatio…