206 citations · 559 across the 15 of their papers we have counts for
4 papers · 1 filter
Path sampling challenges in large biomolecular systems: RETIS and REPPTIS for ABL-imatinib kinetics
Wouter Vervust, Daniel T. Zhang, Enrico Riccardi +2
Predicting the kinetics of drug-protein interactions is crucial for understanding drug efficacy, particularly in personalized medicine, where protein mutations can significantly al…
The dynamics of the DNA denaturation transition
Titus S. van Erp, Michel Peyrard
The dynamics of the DNA denaturation is studied using the Peyrard-Bishop-Dauxois model. The denaturation rate of double stranded polymers decreases exponentially as function of len…
Comment on "A generalized Langevin formalism of complete DNA melting transition"
Titus S. van Erp, Santiago Cuesta-Lopez, Johannes-Geert Hagmann +1
We show that the calculated DNA denaturation curves for finite (Peyrard-Bishop-Dauxois (PBD) chains are intrinsically undefined.
Can one predict DNA Transcription Start Sites by studying bubbles?
Titus S. van Erp, Santiago Cuesta-Lopez, Johannes-Geert Hagmann +1
It has been speculated that bubble formation of several base-pairs due to thermal fluctuations is indicatory for biological active sites. Recent evidence, based on experiments and…