35 citations · 117 across the 12 of their papers we have counts for
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q-bio.BM2014★ 2 cited
Breathing dynamics based parameter sensitivity analysis of hetero-polymeric DNA
Srijeeta Talukder, Shrabani Sen, Prantik Chakraborti +3
We study the parameter sensitivity of hetero-polymeric DNA within the purview of DNA breathing dynamics. The degree of correlation between the mean bubble size and the model parame…
q-bio.BM2011★ 25 cited
Determining the DNA stability parameters for the breathing dynamics of heterogeneous DNA by stochastic optimization
Srijeeta Talukder, Pinaki Chaudhury, Ralf Metzler +1
We suggest that the thermodynamic stability parameters (nearest neighbor stacking and hydrogen bonding free energies) of double-stranded DNA molecules can be inferred reliably from…