7 citations · 8 across the 3 of their papers we have counts for
4 papers
Information transmission in a two-step cascade: Interplay of activation and repression
Tuhin Subhra Roy, Mintu Nandi, Ayan Biswas +2
We present an information-theoretic formalism to study signal transduction in four architectural variants of a model two-step cascade with increasing input population. Our results…
Information processing in a simple one-step cascade
Mintu Nandi, Ayan Biswas, Suman K Banik +1
Using the formalism of information theory, we analyze the mechanism of information transduction in a simple one-step signaling cascade SX representing the gene regulat…
Finding the optimum activation energy in DNA breathing dynamics: A Simulated Annealing approach
Pinaki Chaudhury, Ralf Metzler, Suman K Banik
We demonstrate how the stochastic global optimization scheme of Simulated Annealing can be used to evaluate optimum parameters in the problem of DNA breathing dynamics. The breathi…
Transport and bistable kinetics of a Brownian particle in a nonequilibrium environment
Jyotipratim Ray Chaudhuri, Suman Kumar Banik, Sudip Chattopadhyay +1
A system reservoir model, where the associated reservoir is modulated by an external colored random force, is proposed to study the transport of an overdamped Brownian particle in…