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20092021
most citedDefining phylogenetic networks using ancestral profiles

1 citations · 1 across the 5 of their papers we have counts for

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9 papers · 1 filter

math.CO2020

Trinets encode orchard phylogenetic networks

Charles Semple, Gerry Toft

Rooted triples, rooted binary phylogenetic trees on three leaves, are sufficient to encode rooted binary phylogenetic trees. That is, if and are rooted b…

math.CO20201 cited

Defining phylogenetic networks using ancestral profiles

Allan Bai, Peter Erdos, Charles Semple +1

Rooted phylogenetic networks provide a more complete representation of the ancestral relationship between species than phylogenetic trees when reticulate evolutionary processes are…

math.CO2020

Caterpillars on three and four leaves are sufficient to reconstruct normal networks

Simone Linz, Charles Semple

While every rooted binary phylogenetic tree is determined by its set of displayed rooted triples, such a result does not hold for an arbitrary rooted binary phylogenetic network. I…

math.CO2019

Display sets of normal and tree-child networks

Janosch Doecker, Simone Linz, Charles Semple

Phylogenetic trees canonically arise as embeddings of phylogenetic networks. We recently showed that the problem of deciding if two phylogenetic networks embed the same sets of phy…

math.CO2019

Displaying trees across two phylogenetic networks

Janosch Döcker, Simone Linz, Charles Semple

Phylogenetic networks are a generalization of phylogenetic trees to leaf-labeled directed acyclic graphs that represent ancestral relationships between species whose past includes…

math.CO2019

A class of phylogenetic networks reconstructable from ancestral profiles

Peter L. Erdos, Charles Semple, Mike Steel

Rooted phylogenetic networks provide an explicit representation of the evolutionary history of a set of sampled species. In contrast to phylogenetic trees which show only speci…