3 papers
cs.LG2025
Soft Graph Clustering for single-cell RNA Sequencing Data
Ping Xu, Pengfei Wang, Zhiyuan Ning +3
Clustering analysis is fundamental in single-cell RNA sequencing (scRNA-seq) data analysis for elucidating cellular heterogeneity and diversity. Recent graph-based scRNA-seq cluste…
cs.LG2025
Rethinking Graph Contrastive Learning through Relative Similarity Preservation
Zhiyuan Ning, Pengfei Wang, Ziyue Qiao +2
Graph contrastive learning (GCL) has achieved remarkable success by following the computer vision paradigm of preserving absolute similarity between augmented views. However, this…
q-bio.GN2025
scSiameseClu: A Siamese Clustering Framework for Interpreting single-cell RNA Sequencing Data
Ping Xu, Zhiyuan Ning, Pengjiang Li +5
Single-cell RNA sequencing (scRNA-seq) reveals cell heterogeneity, with cell clustering playing a key role in identifying cell types and marker genes. Recent advances, especially g…