5 papers
Reliable mechanistic operator recovery with biologically-informed neural networks: principles for architecture and optimisation design
Rebecca M. Crossley, Yuan Yin, Sarah L. Waters +1
Many biological processes are governed by complex dynamical mechanisms that remain incompletely understood despite increasing volumes of experimental data. Biologically-informed ne…
Bacterial turbulence at compressible fluid interfaces
Yuanfeng Yin, Bokai Zhang, H. P. Zhang +1
Dense bacterial suspensions at fluid interfaces provide a natural platform to explore active turbulence in a dimensional mismatch: active units are restricted to a two-dimensional…
The influence of cell phenotype on collective cell invasion into the extracellular matrix
Yuan Yin, Sarah L. Waters, Ruth E. Baker
Understanding the interactions between cells and the extracellular matrix (ECM) during collective cell invasion is crucial for advancements in tissue engineering, cancer therapies,…
Accurate stochastic simulation algorithm for multiscale models of infectious diseases
Yuan Yin, Jennifer A. Flegg, Mark B. Flegg
In the infectious disease literature, significant effort has been devoted to studying dynamics at a single scale. For example, compartmental models describing population-level dyna…
Modeling the extracellular matrix in cell migration and morphogenesis: A guide for the curious biologist
Rebecca M. Crossley, Samuel Johnson, Erika Tsingos +8
The extracellular matrix (ECM) is a highly complex structure through which biochemical and mechanical signals are transmitted. In processes of cell migration, the ECM also acts as…