4 citations · 9 across the 11 of their papers we have counts for
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cs.LG2024★ 4 cited
Unifying Sequences, Structures, and Descriptions for Any-to-Any Protein Generation with the Large Multimodal Model HelixProtX
Zhiyuan Chen, Tianhao Chen, Chenggang Xie +4
Proteins are fundamental components of biological systems and can be represented through various modalities, including sequences, structures, and textual descriptions. Despite the…
q-bio.QM2024★ 2 cited
NovoBench: Benchmarking Deep Learning-based De Novo Peptide Sequencing Methods in Proteomics
Jingbo Zhou, Shaorong Chen, Jun Xia +6
Tandem mass spectrometry has played a pivotal role in advancing proteomics, enabling the high-throughput analysis of protein composition in biological tissues. Many deep learning m…
q-bio.QM2024★ 2 cited
AdaNovo: Adaptive \emph{De Novo} Peptide Sequencing with Conditional Mutual Information
Jun Xia, Shaorong Chen, Jingbo Zhou +4
Tandem mass spectrometry has played a pivotal role in advancing proteomics, enabling the analysis of protein composition in biological samples. Despite the development of various d…