activity
20222026
most citedDiscovery of Generalizable TBI Phenotypes Using Multivariate Time-Series Clustering

8 citations · 22 across the 16 of their papers we have counts for

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Showing 2025Show all

6 papers · 1 filter

q-bio.QM2025

Characterizing Fungal Infections in the All of Us Research Program

Md Fantacher Islam, Emeral Norzagaray, Corneliu Antonescu +1

Fungal infections, such as coccidioidomycosis, aspergillosis, and histoplasmosis, represent a growing public health concern in the United States. However, the actual burden of thes…

q-bio.QM2025

Lightweight Language Models are Prone to Reasoning Errors for Complex Computational Phenotyping Tasks

Sarah Pungitore, Shashank Yadav, David Maughan +1

Although computational phenotyping is a central informatics activity with resulting cohorts supporting a wide variety of applications, it is time-intensive because of manual data r…

q-bio.OT2025★ 1 cited

Development and Evaluation of an Ontology for Non-Invasive Respiratory Support in Acute Care

Md Fantacher Islam, Jarrod Mosier, Vignesh Subbian

Managing patients with respiratory failure increasingly involves noninvasive respiratory support (NIRS) strategies to support respiration, often preventing the need for invasive me…

cs.LG2025

Failure Modes of Time Series Interpretability Algorithms for Critical Care Applications and Potential Solutions

Shashank Yadav, Vignesh Subbian

Interpretability plays a vital role in aligning and deploying deep learning models in critical care, especially in constantly evolving conditions that influence patient survival. H…

q-bio.QM2025

SHREC: A Framework for Advancing Next-Generation Computational Phenotyping with Large Language Models

Sarah Pungitore, Shashank Yadav, Molly Douglas +2

Computational phenotyping is a central informatics activity with resulting cohorts supporting a wide variety of applications. However, it is time-intensive because of manual data r…

cs.CL2025

PHEONA: An Evaluation Framework for Large Language Model-based Approaches to Computational Phenotyping

Sarah Pungitore, Shashank Yadav, Vignesh Subbian

Computational phenotyping is essential for biomedical research but often requires significant time and resources, especially since traditional methods typically involve extensive m…