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20212026
most citedDPPIN: A Biological Repository of Dynamic Protein-Protein Interaction Network Data

4 citations · 33 across the 27 of their papers we have counts for

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17 papers · 1 filter

cs.LG2026

OWLEYE: Zero-Shot Learner for Cross-Domain Graph Data Anomaly Detection

Lecheng Zheng, Dongqi Fu, Zihao Li +1

Graph data is informative to represent complex relationships such as transactions between accounts, communications between devices, and dependencies among machines or processes. Co…

cs.LG2025

Graph4MM: Weaving Multimodal Learning with Structural Information

Xuying Ning, Dongqi Fu, Tianxin Wei +2

Real-world multimodal data usually exhibit complex structural relationships beyond traditional one-to-one mappings like image-caption pairs. Entities across modalities interact in…

cs.LG2025

Learnable Spatial-Temporal Positional Encoding for Link Prediction

Katherine Tieu, Dongqi Fu, Zihao Li +2

Accurate predictions rely on the expressiveness power of graph deep learning frameworks like graph neural networks and graph transformers, where a positional encoding mechanism has…

cs.LG2025

Invariant Link Selector for Spatial-Temporal Out-of-Distribution Problem

Katherine Tieu, Dongqi Fu, Jun Wu +1

In the era of foundation models, Out-of- Distribution (OOD) problems, i.e., the data discrepancy between the training environments and testing environments, hinder AI generalizatio…

cs.LG2025★ 1 cited

ClimateBench-M: A Multi-Modal Climate Data Benchmark with a Simple Generative Method

Dongqi Fu, Yada Zhu, Zhining Liu +10

Climate science studies the structure and dynamics of Earth's climate system and seeks to understand how climate changes over time, where the data is usually stored in the format o…

cs.LG2025★ 1 cited

Language in the Flow of Time: Time-Series-Paired Texts Weaved into a Unified Temporal Narrative

Zihao Li, Xiao Lin, Zhining Liu +8

While many advances in time series models focus exclusively on numerical data, research on multimodal time series, particularly those involving contextual textual information, rema…

cs.LG2024★ 3 cited

PyG-SSL: A Graph Self-Supervised Learning Toolkit

Lecheng Zheng, Baoyu Jing, Zihao Li +9

Graph Self-Supervised Learning (SSL) has emerged as a pivotal area of research in recent years. By engaging in pretext tasks to learn the intricate topological structures and prope…

cs.LG2024★ 4 cited

APEX: Adaptive and Extreme Summarization for Personalized Knowledge Graphs

Zihao Li, Dongqi Fu, Mengting Ai +1

Knowledge graphs (KGs), which store an extensive number of relational facts, serve various applications. Recently, personalized knowledge graphs (PKGs) have emerged as a solution t…

cs.LG2024

Can Graph Neural Networks Learn Language with Extremely Weak Text Supervision?

Zihao Li, Lecheng Zheng, Bowen Jin +5

While great success has been achieved in building vision models with Contrastive Language-Image Pre-training (CLIP) over internet-scale image-text pairs, building transferable Grap…

cs.LG2024★ 3 cited

PageRank Bandits for Link Prediction

Yikun Ban, Jiaru Zou, Zihao Li +5

Link prediction is a critical problem in graph learning with broad applications such as recommender systems and knowledge graph completion. Numerous research efforts have been dire…

cs.LG2024★ 2 cited

Generating Fine-Grained Causality in Climate Time Series Data for Forecasting and Anomaly Detection

Dongqi Fu, Yada Zhu, Hanghang Tong +3

Understanding the causal interaction of time series variables can contribute to time series data analysis for many real-world applications, such as climate forecasting and extreme…

cs.LG2024★ 3 cited

VCR-Graphormer: A Mini-batch Graph Transformer via Virtual Connections

Dongqi Fu, Zhigang Hua, Yan Xie +7

Graph transformer has been proven as an effective graph learning method for its adoption of attention mechanism that is capable of capturing expressive representations from complex…

cs.LG2023

Privacy-Preserving Graph Machine Learning from Data to Computation: A Survey

Dongqi Fu, Wenxuan Bao, Ross Maciejewski +2

In graph machine learning, data collection, sharing, and analysis often involve multiple parties, each of which may require varying levels of data security and privacy. To this end…

cs.LG2022★ 3 cited

MentorGNN: Deriving Curriculum for Pre-Training GNNs

Dawei Zhou, Lecheng Zheng, Dongqi Fu +2

Graph pre-training strategies have been attracting a surge of attention in the graph mining community, due to their flexibility in parameterizing graph neural networks (GNNs) witho…

cs.LG2022★ 2 cited

DISCO: Comprehensive and Explainable Disinformation Detection

Dongqi Fu, Yikun Ban, Hanghang Tong +2

Disinformation refers to false information deliberately spread to influence the general public, and the negative impact of disinformation on society can be observed in numerous iss…

cs.LG2021★ 3 cited

Deeper-GXX: Deepening Arbitrary GNNs

Lecheng Zheng, Dongqi Fu, Ross Maciejewski +1

Recently, motivated by real applications, a major research direction in graph neural networks (GNNs) is to explore deeper structures. For instance, the graph connectivity is not al…

cs.LG2021★ 4 cited

DPPIN: A Biological Repository of Dynamic Protein-Protein Interaction Network Data

Dongqi Fu, Jingrui He

In the big data era, the relationship between entries becomes more and more complex. Many graph (or network) algorithms have already paid attention to dynamic networks, which are m…