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From Memorization to Generalization: Fine-Tuning Large Language Models for Biomedical Term-to-Identifier Normalization
Suswitha Pericharla, Daniel B. Hier, Tayo Obafemi-Ajayi
Effective biomedical data integration depends on automated term normalization, the mapping of natural language biomedical terms to standardized identifiers. This linking of terms t…
cs.CL2025
Predicting Failures of LLMs to Link Biomedical Ontology Terms to Identifiers Evidence Across Models and Ontologies
Daniel B. Hier, Steven Keith Platt, Tayo Obafemi-Ajayi
Large language models often perform well on biomedical NLP tasks but may fail to link ontology terms to their correct identifiers. We investigate why these failures occur by analyz…