42 citations · 55 across the 10 of their papers we have counts for
10 papers
Scientific Data Skills: Enabling Agent-Ready Scientific Data Services at Scale
Xiaohan Huang, Qingqing Long, Xiaolei Du +8
Scientific data are increasingly used by AI agents, yet existing dataset representations provide limited support for reliable dataset discovery and interpretation, constraining the…
From Snapshots to Trajectories: Learning Single-Cell Gene Expression Dynamics via Conditional Flow Matching
Siyu Pu, Qingqing Long, Xiaohan Huang +7
Single-cell RNA sequencing (scRNA-seq) provides high-dimensional profiles of cellular states, enabling data-driven modeling of cellular dynamics over time. In practice, time-resolv…
DeepEra: A Deep Evidence Reranking Agent for Scientific Retrieval-Augmented Generated Question Answering
Haotian Chen, Qingqing Long, Siyu Pu +6
With the rapid growth of scientific literature, scientific question answering (SciQA) has become increasingly critical for exploring and utilizing scientific knowledge. Retrieval-A…
ScienceDB AI: An LLM-Driven Agentic Recommender System for Large-Scale Scientific Data Sharing Services
Qingqing Long, Haotian Chen, Chenyang Zhao +6
The rapid growth of AI for Science (AI4S) has underscored the significance of scientific datasets, leading to the establishment of numerous national scientific data centers and sha…
SciRerankBench: Benchmarking Rerankers Towards Scientific Retrieval-Augmented Generation with LLMs
Haotian Chen, Qingqing Long, Meng Xiao +6
Scientific literature question answering is a pivotal step towards new scientific discoveries. Recently, \textit{two-stage} retrieval-augmented generated large language models (RAG…
Comprehensive Metapath-based Heterogeneous Graph Transformer for Gene-Disease Association Prediction
Wentao Cui, Shoubo Li, Chen Fang +4
Discovering gene-disease associations is crucial for understanding disease mechanisms, yet identifying these associations remains challenging due to the time and cost of biological…
GeneSUM: Large Language Model-based Gene Summary Extraction
Zhijian Chen, Chuan Hu, Min Wu +4
Emerging topics in biomedical research are continuously expanding, providing a wealth of information about genes and their function. This rapid proliferation of knowledge presents…
BioRAG: A RAG-LLM Framework for Biological Question Reasoning
Chengrui Wang, Qingqing Long, Meng Xiao +5
The question-answering system for Life science research, which is characterized by the rapid pace of discovery, evolving insights, and complex interactions among knowledge entities…
COMAE: COMprehensive Attribute Exploration for Zero-shot Hashing
Yuqi Li, Qingqing Long, Yihang Zhou +6
Zero-shot hashing (ZSH) has shown excellent success owing to its efficiency and generalization in large-scale retrieval scenarios. While considerable success has been achieved, the…
TWIST-GAN: Towards Wavelet Transform and Transferred GAN for Spatio-Temporal Single Image Super Resolution
Fayaz Ali Dharejo, Farah Deeba, Yuanchun Zhou +5
Single Image Super-resolution (SISR) produces high-resolution images with fine spatial resolutions from aremotely sensed image with low spatial resolution. Recently, deep learning…