455 citations · 1.4k across the 20 of their papers we have counts for
6 papers · 1 filter
Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis
Jaeyun Sung, Seunghyeon Kim, Josephine Jill T. Cabatbat +5
A system-level framework of complex microbe-microbe and host-microbe chemical cross-talk would help elucidate the role of our gut microbiota in health and disease. Here we report a…
Kernel Architecture of the Genetic Circuitry of the Arabidopsis Circadian System
Mathias Foo, David E. Somers, Pan-Jun Kim
A wide range of organisms features molecular machines, circadian clocks, which generate endogenous oscillations with ~24 h periodicity and thereby synchronize biological processes…
Genetic Co-Occurrence Network across Sequenced Microbes
Pan-Jun Kim, Nathan D. Price
The phenotype of any organism on earth is, in large part, the consequence of interplay between numerous gene products encoded in the genome, and such interplay between gene product…
Accomplishments in Genome-Scale In Silico Modeling for Industrial and Medical Biotechnology
Caroline B. Milne, Pan-Jun Kim, James A. Eddy +1
Driven by advancements in high-throughput biological technologies and the growing number of sequenced genomes, the construction of in silico models at the genome scale has provided…
Centralized Modularity of N-Linked Glycosylation Pathways in Mammalian Cells
Pan-Jun Kim, Dong-Yup Lee, Hawoong Jeong
Glycosylation is a highly complex process to produce a diverse repertoire of cellular glycans that are attached to proteins and lipids. Glycans are involved in fundamental biologic…
Metabolite essentiality elucidates robustness of Escherichia coli metabolism
Pan-Jun Kim, Dong-Yup Lee, Tae Yong Kim +4
Complex biological systems are very robust to genetic and environmental changes at all levels of organization. Many biological functions of Escherichia coli metabolism can be susta…