455 citations · 1.4k across the 20 of their papers we have counts for
20 papers
Microbiome-derived bile acids contribute to elevated antigenic response and bone erosion in rheumatoid arthritis
Xiuli Su, Xiaona Li, Yanqin Bian +15
Rheumatoid arthritis (RA) is a chronic, disabling and incurable autoimmune disease. It has been widely recognized that gut microbial dysbiosis is an important contributor to the pa…
Waveforms of molecular oscillations reveal circadian timekeeping mechanisms
Hang-Hyun Jo, Yeon Jeong Kim, Jae Kyoung Kim +3
Circadian clocks play a pivotal role in orchestrating numerous physiological and developmental events. Waveform shapes of the oscillations of protein abundances can be informative…
Nutritionally recommended food for semi- to strict vegetarian diets based on large-scale nutrient composition data
Seunghyeon Kim, Michael F. Fenech, Pan-Jun Kim
Diet design for vegetarian health is challenging due to the limited food repertoire of vegetarians. This challenge can be partially overcome by quantitative, data-driven approaches…
Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis
Jaeyun Sung, Seunghyeon Kim, Josephine Jill T. Cabatbat +5
A system-level framework of complex microbe-microbe and host-microbe chemical cross-talk would help elucidate the role of our gut microbiota in health and disease. Here we report a…
Kernel Architecture of the Genetic Circuitry of the Arabidopsis Circadian System
Mathias Foo, David E. Somers, Pan-Jun Kim
A wide range of organisms features molecular machines, circadian clocks, which generate endogenous oscillations with ~24 h periodicity and thereby synchronize biological processes…
Uncovering the nutritional landscape of food
Seunghyeon Kim, Jaeyun Sung, Mathias Foo +2
Recent progresses in data-driven analysis methods, including network-based approaches, are revolutionizing many classical disciplines. These techniques can also be applied to food…