170 citations · 2.2k across the 59 of their papers we have counts for
59 papers
Non-equilibrium symmetry of cyclic first-passage times
Daniel Maria Busiello, Shiling Liang, Simone Pigolotti
We study the sum of first passage times along an arbitrary cycle made up of N>2 states of a small physical system. We show that, if the system is at thermodynamic equilibrium, this…
Unifying Theories in High-Dimensional Biology: Approaches, Challenges and Opportunities
Marianne Bauer, Akshit Goyal, Sidhartha Goyal +19
Across biological subdisciplines, the last decade has seen an explosion of high-dimensional datasets, including datasets for cells, species, immune systems, neurons and behaviour.…
Thermodynamic bounds on time-reversal asymmetry
Shiling Liang, Simone Pigolotti
Quantifying irreversibility of a system using finite information constitutes a major challenge in stochastic thermodynamics. We introduce an observable that measures the time-rever…
Martingales for physicists: A treatise on stochastic thermodynamics and beyond
Édgar Roldán, Izaak Neri, Raphael Chetrite +4
We review the theory of martingales as applied to stochastic thermodynamics and stochastic processes in physics more generally.
Pareto optimal fronts of kinetic proofreading
Davide Chiuchiu, Shrabani Mondal, Simone Pigolotti
Biological processes such as DNA replication, RNA transcription, and protein translation show remarkable speed and accuracy in selecting the right substrate from pools of chemicall…
Coalescent dynamics of planktonic communities
Paula Villa Martin, Anzhelika Koldaeva, Simone Pigolotti
Planktonic communities are extremely diverse and include a vast number of rare species. The dynamics of these rare species is best described by individual-based models. However, in…