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cs.LG2025
DMark: Order-Agnostic Watermarking for Diffusion Large Language Models
Linyu Wu, Linhao Zhong, Wenjie Qu +5
Diffusion large language models (dLLMs) offer faster generation than autoregressive models while maintaining comparable quality, but existing watermarking methods fail on them due…
cs.LG2025
Evolutionary Profiles for Protein Fitness Prediction
Jigang Fan, Xiaoran Jiao, Shengdong Lin +5
Predicting the fitness impact of mutations is central to protein engineering but constrained by limited assays relative to the size of sequence space. Protein language models (pLMs…
cs.LG2025
Revisiting Convolution Architecture in the Realm of DNA Foundation Models
Yu Bo, Weian Mao, Yanjun Shao +6
In recent years, a variety of methods based on Transformer and state space model (SSM) architectures have been proposed, advancing foundational DNA language models. However, there…