69 citations · 72 across the 6 of their papers we have counts for
6 papers
Characterization of the low temperature properties of a simplified protein model
Johannes-Geert Hagmann, Naoko Nakagawa, Michel Peyrard
Prompted by results that showed that a simple protein model, the frustrated Gō model, appears to exhibit a transition reminiscent of the protein dynamical transition, we examine th…
Critical examination of the inherent-structure-landscape analysis of two-state folding proteins
Johannnes-Geert Hagmann, Naoko Nakagawa, Michel Peyrard
Recent studies attracted the attention on the inherent structure landscape (ISL) approach as a reduced description of proteins allowing to map their full thermodynamic properties.…
On 4-point correlation functions in simple polymer models
Johannes-Geert Hagmann, Karol K. Kozlowski, Nikos Theodorakopoulos +1
We derive an exact formula for the covariance of cartesian distances in two simple polymer models, the freely-jointed chain and a discrete flexible model with nearest-neighbor inte…
Comment on "A generalized Langevin formalism of complete DNA melting transition"
Titus S. van Erp, Santiago Cuesta-Lopez, Johannes-Geert Hagmann +1
We show that the calculated DNA denaturation curves for finite (Peyrard-Bishop-Dauxois (PBD) chains are intrinsically undefined.
Far-off-resonant wave interaction in one-dimensional photonic crystals with quadratic nonlinearity
Johannes-Geert Hagmann, Lasha Tkeshelashvili, Kurt Busch +1
We extend a recently developed Hamiltonian formalism for nonlinear wave interaction processes in spatially periodic dielectric structures to the far-off-resonant regime, and invest…
Can one predict DNA Transcription Start Sites by studying bubbles?
Titus S. van Erp, Santiago Cuesta-Lopez, Johannes-Geert Hagmann +1
It has been speculated that bubble formation of several base-pairs due to thermal fluctuations is indicatory for biological active sites. Recent evidence, based on experiments and…