47 citations · 157 across the 8 of their papers we have counts for
4 papers · 1 filter
Mechanism of robust circadian oscillation of KaiC phosphorylation in vitro
Kohei Eguchi, Mitsumasa Yoda, Tomoki P. Terada +1
By incubating the mixture of three cyanobacterial proteins, KaiA, KaiB, and KaiC, with ATP in vitro, Kondo and his colleagues reconstituted the robust circadian rhythm of the phosp…
Stable stochastic dynamics in yeast cell cycle
Yurie Okabe, Masaki Sasai
Chemical reactions in cell are subject to intense stochastic fluctuations. An important question is how the fundamental physiological behavior of cell is kept stable against those…
Effects of the DNA state fluctuation on single-cell dynamics of self-regulating gene
Yurie Okabe, Yuu Yagi, Masaki Sasai
A dynamical mean-field theory is developed to analyze stochastic single-cell dynamics of gene expression. By explicitly taking account of nonequilibrium and nonadiabatic features o…
Self consistent proteomic field theory of stochastic gene switches
Aleksandra M. Walczak, Masaki Sasai, Peter G. Wolynes
We present a self-consistent field approximation to the problem of the genetic switch composed of two mutually repressing/activating genes. The protein and DNA state dynamics are t…