33 citations · 37 across the 8 of their papers we have counts for
4 papers · 1 filter
Codon Bias Patterns of 's Interacting Proteins
Maddalena Dilucca, Giulio Cimini, Andrea Semmoloni +2
Synonymous codons, i.e., DNA nucleotide triplets coding for the same amino acid, are used differently across the variety of living organisms. The biological meaning of this phenome…
Is the unfoldome widespread in proteomes?
Antonio Deiana, Andrea Giansanti
The term unfoldome has been recently used to indicate the universe of intrinsically disordered proteins. These proteins are characterized by an ensemble of high-flexible interchang…
Amino acid composition and thermal stability of protein structures: the free energy geography of the Protein Data Bank
Antonio Deiana, Kana Shimizu, Andrea Giansanti
We study the combined influence of amino acid composition and chain length on the thermal stability of protein structures. A new parameterization of the internal free energy is con…
Number of natively unfolded proteins scales with genome size
Antonio Deiana, Andrea Giansanti
Natively unfolded proteins exist as an ensemble of flexible conformations lacking a well defined tertiary structure along a large portion of their polypeptide chain. Despite the ab…