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20212026
most citedSnakeLines: integrated set of computational pipelines for sequencing reads

2 citations · 3 across the 5 of their papers we have counts for

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cs.DS2022★ 1 cited

MARIA: Multiple-alignment -index with aggregation

Adrián Goga, Andrej Baláž, Alessia Petescia +1

There now exist compact indexes that can efficiently list all the occurrences of a pattern in a dataset consisting of thousands of genomes, or even all the occurrences of all the p…

cs.DS2022

Prefix-free parsing for building large tunnelled Wheeler graphs

Adrián Goga, Andrej Baláž

We propose a new technique for creating a space-efficient index for large repetitive text collections, such as pangenomic databases containing sequences of many individuals from th…