3 papers
cs.IR2024
Exploring Optimal Transport-Based Multi-Grained Alignments for Text-Molecule Retrieval
Zijun Min, Bingshuai Liu, Liang Zhang +4
The field of bioinformatics has seen significant progress, making the cross-modal text-molecule retrieval task increasingly vital. This task focuses on accurately retrieving molecu…
cs.IR2024
Towards Cross-Modal Text-Molecule Retrieval with Better Modality Alignment
Jia Song, Wanru Zhuang, Yujie Lin +5
Cross-modal text-molecule retrieval model aims to learn a shared feature space of the text and molecule modalities for accurate similarity calculation, which facilitates the rapid…
cs.LG2024
Pre-Training Protein Bi-level Representation Through Span Mask Strategy On 3D Protein Chains
Jiale Zhao, Wanru Zhuang, Jia Song +2
In recent years, there has been a surge in the development of 3D structure-based pre-trained protein models, representing a significant advancement over pre-trained protein languag…