78 citations · 215 across the 10 of their papers we have counts for
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q-bio.BM2021★ 2 cited
Persistent topology of protein space
W. Hamilton, J. E. Borgert, T. Hamelryck +1
Protein fold classification is a classic problem in structural biology and bioinformatics. We approach this problem using persistent homology. In particular, we use alpha shape fil…
q-bio.BM2010★ 78 cited
Potentials of Mean Force for Protein Structure Prediction Vindicated, Formalized and Generalized
Thomas Hamelryck, Mikael Borg, Martin Paluszewski +6
Understanding protein structure is of crucial importance in science, medicine and biotechnology. For about two decades, knowledge based potentials based on pairwise distances -- so…