30 citations · 55 across the 3 of their papers we have counts for
4 papers
Genome assembly in the telomere-to-telomere era
Heng Li, Richard Durbin
De novo assembly is the process of reconstructing the genome sequence of an organism from sequencing reads. Genome sequences are essential to biology, and assembly has been a centr…
Haplotype-aware graph indexes
Jouni Sirén, Erik Garrison, Adam M. Novak +2
The variation graph toolkit (VG) represents genetic variation as a graph. Each path in the graph is a potential haplotype, though most paths are unlikely recombinations of true hap…
YFitter: Maximum likelihood assignment of Y chromosome haplogroups from low-coverage sequence data
Luke Jostins, Yali Xu, Shane McCarthy +4
Low-coverage short-read resequencing experiments have the potential to expand our understanding of Y chromosome haplogroups. However, the uncertainty associated with these experime…
A genome-wide survey of genetic variation in gorillas using reduced representation sequencing
Aylwyn Scally, Bryndis Yngvadottir, Yali Xue +3
All non-human great apes are endangered in the wild, and it is therefore important to gain an understanding of their demography and genetic diversity. To date, however, genetic stu…