activity
20202026
most citedSpeed and fate diversity tradeoff in nematode's early embryogenesis

1 citations · 3 across the 8 of their papers we have counts for

collaborators

8 papers

cond-mat.soft2026

Cell size and confinement drive asymmetric cell division through a cortical instability

Da Gao, Guoye Guan, Chao Tang +1

Asymmetric cell division -- in which a mother cell divides into two daughter cells of unequal size -- is a fundamental problem in biology. It is believed that the asymmetry origina…

physics.bio-ph2025

CTransformer: Deep-transformer-based 3D cell membrane tracking with subcellular-resolved molecular quantification

Zelin Li, Guoye Guan, Xiu Xian +13

Deep learning segmentation and fluorescence imaging techniques allow the cellular morphology of living embryos to be constructed spatiotemporally. These development processes invol…

cs.LG2025

DiffeoMorph: Learning to Morph 3D Shapes Using Differentiable Agent-Based Simulations

Seong Ho Pahng, Guoye Guan, Benjamin Fefferman +1

Biological systems can form complex three-dimensional structures through the collective behavior of agents that share a common update rule and operate without central control. How…

eess.IV2025

CellINR: Implicitly Overcoming Photo-induced Artifacts in 4D Live Fluorescence Microscopy

Cunmin Zhao, Ziyuan Luo, Guoye Guan +4

4D live fluorescence microscopy is often compromised by prolonged high intensity illumination which induces photobleaching and phototoxic effects that generate photo-induced artifa…

q-bio.MN2024

Balancing reaction-diffusion network for cell polarization pattern with stability and asymmetry

Yixuan Chen, Guoye Guan, Lei-Han Tang +1

Cell polarization is a critical process that separates molecular species into two distinct regions in prokaryotic and eukaryotic cells, guiding biological processes such as cell di…

physics.bio-ph2022★ 1 cited

MorphoSim: An efficient and scalable phase-field framework for accurately simulating multicellular morphologies

Xiangyu Kuang, Guoye Guan, Chao Tang +1

The phase field model can accurately simulate the evolution of microstructures with complex morphologies, and it has been widely used for cell modeling in the last two decades. How…

q-bio.CB2021★ 1 cited

Spontaneous mechanical and energetic state transitions during Caenorhabditis elegans gastrulation

Jiao Miao, Guoye Guan, Chao Tang

Gastrulation, namely cell internalization, is a significant milestone during the development of metazoans from worm to human, which generates multiple embryonic layers with distinc…

q-bio.CB2020★ 1 cited

Speed and fate diversity tradeoff in nematode's early embryogenesis

Guoye Guan, Ming-Kin Wong, Zhongying Zhao +2

Nematode species are well-known for their invariant cell lineage pattern during development. Combining knowledge about the fate specification induced by asymmetric division and the…