activity
20192023
most citedDeep Learning-enabled Virtual Histological Staining of Biological Samples

354 citations · 2.8k across the 40 of their papers we have counts for

collaborators

40 papers

physics.optics2023★ 60 cited

All-optical image denoising using a diffractive visual processor

Cagatay Isıl, Tianyi Gan, F. Onuralp Ardic +9

Image denoising, one of the essential inverse problems, targets to remove noise/artifacts from input images. In general, digital image denoising algorithms, executed on computers,…

physics.optics2023★ 31 cited

Multispectral Quantitative Phase Imaging Using a Diffractive Optical Network

Che-Yung Shen, Jingxi Li, Deniz Mengu +1

As a label-free imaging technique, quantitative phase imaging (QPI) provides optical path length information of transparent specimens for various applications in biology, materials…

cs.CV2023★ 6 cited

Cycle Consistency-based Uncertainty Quantification of Neural Networks in Inverse Imaging Problems

Luzhe Huang, Jianing Li, Xiaofu Ding +3

Uncertainty estimation is critical for numerous applications of deep neural networks and draws growing attention from researchers. Here, we demonstrate an uncertainty quantificatio…

physics.optics2023★ 24 cited

Broadband nonlinear modulation of incoherent light using a transparent optoelectronic neuron array

Dehui Zhang, Dong Xu, Yuhang Li +14

Nonlinear optical processing of ambient natural light is highly desired in computational imaging and sensing applications. A strong optical nonlinear response that can work under w…

physics.optics2023★ 37 cited

Learning Diffractive Optical Communication Around Arbitrary Opaque Occlusions

Md Sadman Sakib Rahman, Tianyi Gan, Emir Arda Deger +3

Free-space optical systems are emerging for high data rate communication and transfer of information in indoor and outdoor settings. However, free-space optical communication becom…

physics.optics2023★ 41 cited

Universal Polarization Transformations: Spatial programming of polarization scattering matrices using a deep learning-designed diffractive polarization transformer

Yuhang Li, Jingxi Li, Yifan Zhao +4

We demonstrate universal polarization transformers based on an engineered diffractive volume, which can synthesize a large set of arbitrarily-selected, complex-valued polarization…

physics.optics2023★ 20 cited

Optical information transfer through random unknown diffusers using electronic encoding and diffractive decoding

Yuhang Li, Tianyi Gan, Bijie Bai +3

Free-space optical information transfer through diffusive media is critical in many applications, such as biomedical devices and optical communication, but remains challenging due…

physics.optics2023★ 68 cited

Universal Linear Intensity Transformations Using Spatially-Incoherent Diffractive Processors

Md Sadman Sakib Rahman, Xilin Yang, Jingxi Li +2

Under spatially-coherent light, a diffractive optical network composed of structured surfaces can be designed to perform any arbitrary complex-valued linear transformation between…

physics.optics2023★ 73 cited

Rapid Sensing of Hidden Objects and Defects using a Single-Pixel Diffractive Terahertz Processor

Jingxi Li, Xurong Li, Nezih T. Yardimci +6

Terahertz waves offer numerous advantages for the nondestructive detection of hidden objects/defects in materials, as they can penetrate through most optically-opaque materials. Ho…

physics.optics2023★ 9 cited

Roadmap on Deep Learning for Microscopy

Giovanni Volpe, Carolina Wählby, Lei Tian +72

Through digital imaging, microscopy has evolved from primarily being a means for visual observation of life at the micro- and nano-scale, to a quantitative tool with ever-increasin…

physics.med-ph2023★ 53 cited

Deep learning-enabled multiplexed point-of-care sensor using a paper-based fluorescence vertical flow assay

Artem Goncharov, Hyou-Arm Joung, Rajesh Ghosh +8

We demonstrate multiplexed computational sensing with a point-of-care serodiagnosis assay to simultaneously quantify three biomarkers of acute cardiac injury. This point-of-care se…

physics.optics2023★ 37 cited

Quantitative phase imaging (QPI) through random diffusers using a diffractive optical network

Yuhang Li, Yi Luo, Deniz Mengu +2

Quantitative phase imaging (QPI) is a label-free computational imaging technique used in various fields, including biology and medical research. Modern QPI systems typically rely o…

physics.optics2023★ 23 cited

eFIN: Enhanced Fourier Imager Network for generalizable autofocusing and pixel super-resolution in holographic imaging

Hanlong Chen, Luzhe Huang, Tairan Liu +1

The application of deep learning techniques has greatly enhanced holographic imaging capabilities, leading to improved phase recovery and image reconstruction. Here, we introduce a…

physics.optics2022★ 59 cited

Data class-specific all-optical transformations and encryption

Bijie Bai, Heming Wei, Xilin Yang +2

Diffractive optical networks provide rich opportunities for visual computing tasks since the spatial information of a scene can be directly accessed by a diffractive processor with…

physics.optics2022★ 110 cited

Snapshot Multispectral Imaging Using a Diffractive Optical Network

Deniz Mengu, Anika Tabassum, Mona Jarrahi +1

Multispectral imaging has been used for numerous applications in e.g., environmental monitoring, aerospace, defense, and biomedicine. Here, we present a diffractive optical network…

physics.optics2022★ 57 cited

Unidirectional Imaging using Deep Learning-Designed Materials

Jingxi Li, Tianyi Gan, Yifan Zhao +5

A unidirectional imager would only permit image formation along one direction, from an input field-of-view (FOV) A to an output FOV B, and in the reverse path, the image formation…

physics.med-ph2022★ 354 cited

Deep Learning-enabled Virtual Histological Staining of Biological Samples

Bijie Bai, Xilin Yang, Yuzhu Li +3

Histological staining is the gold standard for tissue examination in clinical pathology and life-science research, which visualizes the tissue and cellular structures using chromat…

cs.CV2022★ 106 cited

Self-supervised learning of hologram reconstruction using physics consistency

Luzhe Huang, Hanlong Chen, Tairan Liu +1

The past decade has witnessed transformative applications of deep learning in various computational imaging, sensing and microscopy tasks. Due to the supervised learning schemes em…

physics.app-ph2022★ 21 cited

Virtual impactor-based label-free bio-aerosol detection using holography and deep learning

Yi Luo, Yijie Zhang, Tairan Liu +3

Exposure to bio-aerosols such as mold spores and pollen can lead to adverse health effects. There is a need for a portable and cost-effective device for long-term monitoring and qu…

physics.optics2022★ 21 cited

Time-lapse image classification using a diffractive neural network

Md Sadman Sakib Rahman, Aydogan Ozcan

Diffractive deep neural networks (D2NNs) define an all-optical computing framework comprised of spatially engineered passive surfaces that collectively process optical input inform…

cs.NE2022★ 90 cited

Massively Parallel Universal Linear Transformations using a Wavelength-Multiplexed Diffractive Optical Network

Jingxi Li, Bijie Bai, Yi Luo +1

We report deep learning-based design of a massively parallel broadband diffractive neural network for all-optically performing a large group of arbitrarily-selected, complex-valued…

physics.med-ph2022★ 44 cited

Virtual stain transfer in histology via cascaded deep neural networks

Xilin Yang, Bijie Bai, Yijie Zhang +4

Pathological diagnosis relies on the visual inspection of histologically stained thin tissue specimens, where different types of stains are applied to bring contrast to and highlig…

eess.IV2022★ 28 cited

Virtual staining of defocused autofluorescence images of unlabeled tissue using deep neural networks

Yijie Zhang, Luzhe Huang, Tairan Liu +5

Deep learning-based virtual staining was developed to introduce image contrast to label-free tissue sections, digitally matching the histological staining, which is time-consuming,…

physics.ins-det2022★ 56 cited

Rapid and stain-free quantification of viral plaque via lens-free holography and deep learning

Tairan Liu, Yuzhu Li, Hatice Ceylan Koydemir +8

We present a rapid and stain-free quantitative viral plaque assay using lensfree holographic imaging and deep learning. This cost-effective, compact, and automated device significa…