13 citations · 16 across the 8 of their papers we have counts for
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q-bio.GN2024
Rawsamble: Overlapping and Assembling Raw Nanopore Signals using a Hash-based Seeding Mechanism
Can Firtina, Maximilian Mordig, Harun Mustafa +7
Raw nanopore signal analysis is a common approach in genomics to provide fast and resource-efficient analysis without translating the signals to bases (i.e., without basecalling).…
q-bio.GN2019
META: Memory-efficient taxonomic classification and abundance estimation for metagenomics with deep learning
Andreas Georgiou, Vincent Fortuin, Harun Mustafa +1
Metagenomic studies have increasingly utilized sequencing technologies in order to analyze DNA fragments found in environmental samples.One important step in this analysis is the t…