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math.GT2025
Topologically Directed Simulations Reveal the Impact of Geometric Constraints on Knotted Proteins
Agnese Barbensi, Alexander R. Klotz, Dimos Gkountaroulis
Simulations of knotting and unknotting in polymers or other filaments rely on random processes to facilitate topological changes. Here we introduce a method of \textit{topological…
math.GT2025
An exploration of low crossing and chiral cosmetic bands with grid diagrams
Agnese Barbensi, Daniele Celoria, Christopher Ktenidis +3
We computationally explore non-coherent band attachments between low crossing number knots, using grid diagrams. We significantly improve the current H(2)-distance table. In partic…