6 papers · 1 filter
Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework
Wonjin Yoon, Richard Jackson, Elliot Ford +2
In order to assist the drug discovery/development process, pharmaceutical companies often apply biomedical NER and linking techniques over internal and public corpora. Decades of s…
Transferability of Natural Language Inference to Biomedical Question Answering
Minbyul Jeong, Mujeen Sung, Gangwoo Kim +4
Biomedical question answering (QA) is a challenging task due to the scarcity of data and the requirement of domain expertise. Pre-trained language models have been used to address…
Answering Questions on COVID-19 in Real-Time
Jinhyuk Lee, Sean S. Yi, Minbyul Jeong +5
The recent outbreak of the novel coronavirus is wreaking havoc on the world and researchers are struggling to effectively combat it. One reason why the fight is difficult is due to…
Pre-trained Language Model for Biomedical Question Answering
Wonjin Yoon, Jinhyuk Lee, Donghyeon Kim +2
The recent success of question answering systems is largely attributed to pre-trained language models. However, as language models are mostly pre-trained on general domain corpora…
BioBERT: a pre-trained biomedical language representation model for biomedical text mining
Jinhyuk Lee, Wonjin Yoon, Sungdong Kim +4
Biomedical text mining is becoming increasingly important as the number of biomedical documents rapidly grows. With the progress in natural language processing (NLP), extracting va…
CollaboNet: collaboration of deep neural networks for biomedical named entity recognition
Wonjin Yoon, Chan Ho So, Jinhyuk Lee +1
Background: Finding biomedical named entities is one of the most essential tasks in biomedical text mining. Recently, deep learning-based approaches have been applied to biomedical…