activity
19992002
most citedLinear-Time Algorithms for Computing Maximum-Density Sequence Segments with Bioinformatics Applications

49 citations · 49 across the 2 of their papers we have counts for

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Showing 2001Show all

21 papers · 1 filter

cs.CC2001

DNA Self-Assembly For Constructing 3D Boxes

Ming-Yang Kao, Vijay Ramachandran

We propose a mathematical model of DNA self-assembly using 2D tiles to form 3D nanostructures. This is the first work to combine studies in self-assembly and nanotechnology in 3D,…

cs.CE2001

Predicting RNA Secondary Structures with Arbitrary Pseudoknots by Maximizing the Number of Stacking Pairs

Samuel Ieong, Ming-Yang Kao, Tak-Wah Lam +2

The paper investigates the computational problem of predicting RNA secondary structures. The general belief is that allowing pseudoknots makes the problem hard. Existing polynomial…

cs.CE2001

The Risk Profile Problem for Stock Portfolio Optimization

Ming-Yang Kao, Andreas Nolte, Stephen R. Tate

This work initiates research into the problem of determining an optimal investment strategy for investors with different attitudes towards the trade-offs of risk and profit. The pr…

cs.CE2001

The Enhanced Double Digest Problem for DNA Physical Mapping

Ming-Yang Kao, Jared Samet, Wing-Kin Sung

The double digest problem is a common NP-hard approach to constructing physical maps of DNA sequences. This paper presents a new approach called the enhanced double digest problem.…

cs.DS2001

Optimal Augmentation for Bipartite Componentwise Biconnectivity in Linear Time

Tsan-sheng Hsu, Ming-Yang Kao

A graph is componentwise biconnected if every connected component either is an isolated vertex or is biconnected. We present a linear-time algorithm for the problem of adding the s…

cs.CE2001

Optimal Bid Sequences for Multiple-Object Auctions with Unequal Budgets

Yuyu Chen, Ming-Yang Kao, Hsueh-I Lu

In a multiple-object auction, every bidder tries to win as many objects as possible with a bidding algorithm. This paper studies position-randomized auctions, which form a special…