372 citations · 1.8k across the 28 of their papers we have counts for
7 papers · 1 filter
MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval
Qiao Jin, Won Kim, Qingyu Chen +4
Information retrieval (IR) is essential in biomedical knowledge acquisition and clinical decision support. While recent progress has shown that language model encoders perform bett…
BioREx: Improving Biomedical Relation Extraction by Leveraging Heterogeneous Datasets
Po-Ting Lai, Chih-Hsuan Wei, Ling Luo +2
Biomedical relation extraction (RE) is the task of automatically identifying and characterizing relations between biomedical concepts from free text. RE is a central task in biomed…
Opportunities and Challenges for ChatGPT and Large Language Models in Biomedicine and Health
Shubo Tian, Qiao Jin, Lana Yeganova +11
ChatGPT has drawn considerable attention from both the general public and domain experts with its remarkable text generation capabilities. This has subsequently led to the emergenc…
GeneGPT: Augmenting Large Language Models with Domain Tools for Improved Access to Biomedical Information
Qiao Jin, Yifan Yang, Qingyu Chen +1
While large language models (LLMs) have been successfully applied to various tasks, they still face challenges with hallucinations. Augmenting LLMs with domain-specific tools such…
Benchmarking large language models for biomedical natural language processing applications and recommendations
Qingyu Chen, Yan Hu, Xueqing Peng +18
The rapid growth of biomedical literature poses challenges for manual knowledge curation and synthesis. Biomedical Natural Language Processing (BioNLP) automates the process. While…
Interpretable Medical Image Visual Question Answering via Multi-Modal Relationship Graph Learning
Xinyue Hu, Lin Gu, Kazuma Kobayashi +6
Medical visual question answering (VQA) aims to answer clinically relevant questions regarding input medical images. This technique has the potential to improve the efficiency of m…
Bioformer: an efficient transformer language model for biomedical text mining
Li Fang, Qingyu Chen, Chih-Hsuan Wei +2
Pretrained language models such as Bidirectional Encoder Representations from Transformers (BERT) have achieved state-of-the-art performance in natural language processing (NLP) ta…