204 citations · 1.3k across the 41 of their papers we have counts for
5 papers · 1 filter
Computational challenges of cell cycle analysis using single cell transcriptomics
Alexander Chervov, Andrei Zinovyev
The cell cycle is one of the most fundamental biological processes important for understanding normal physiology and various pathologies such as cancer. Single cell RNA sequencing…
DeDaL: Cytoscape 3.0 app for producing and morphing data-driven and structure-driven network layouts
Urszula Czerwinska, Laurence Calzone, Emmanuel Barillot +1
Visualization and analysis of molecular profiling data together with biological networks are able to provide new mechanistical insights into biological functions. Currently, high-t…
Dealing with complexity of biological systems: from data to models
Andrei Zinovyev
Four chapters of the synthesis represent four major areas of my research interests: 1) data analysis in molecular biology, 2) mathematical modeling of biological networks, 3) genom…
Blind source separation methods for deconvolution of complex signals in cancer biology
Andrei Zinovyev, Ulykbek Kairov, Tatiana Karpenyuk +1
Two blind source separation methods (Independent Component Analysis and Non-negative Matrix Factorization), developed initially for signal processing in engineering, found recently…
PCA and K-Means decipher genome
A. N. Gorban, A. Y. Zinovyev
In this paper, we aim to give a tutorial for undergraduate students studying statistical methods and/or bioinformatics. The students will learn how data visualization can help in g…