64 citations · 130 across the 14 of their papers we have counts for
Showing q-bio.GNShow all
2 papers · 1 filter
q-bio.GN2013★ 7 cited
kdetrees: Nonparametric Estimation of Phylogenetic Tree Distributions
Grady Weyenberg, Peter Huggins, Christopher Schardl +2
Motivation: While the majority of gene histories found in a clade of organisms are expected to be generated by a common process (e.g. the coalescent process), it is well-known that…
q-bio.GN2005★ 49 cited
Parametric Alignment of Drosophila Genomes
Colin Dewey, Peter Huggins, Kevin Woods +2
The classic algorithms of Needleman--Wunsch and Smith--Waterman find a maximum a posteriori probability alignment for a pair hidden Markov model (PHMM). In order to process large g…