304 citations · 2.6k across the 75 of their papers we have counts for
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Theoretical Insights into Mechanisms of Stochastic Gating in Channel-Facilitated Molecular Transport
Aram Davtyan, Anatoly B. Kolomeisky
Molecular motion through pores plays a crucial role in various natural and industrial processes. One of the most fascinating features of biological channel-facilitated transport is…
First-passage processes on a filamentous track in a dense traffic: optimizing diffusive search for a target in crowding conditions
Soumendu Ghosh, Bhavya Mishra, Anatoly B. Kolomeisky +1
Several important biological processes are initiated by the binding of a protein to a specific site on the DNA. The strategy adopted by a protein, called transcription factor (TF),…
Mechanisms of Protein Search for Targets on DNA: Theoretical Insights
Alexey A. Shvets, Maria P. Kochugaeva, Anatoly B. Kolomeisky
Protein-DNA interactions are critical for the successful functioning of all natural systems. The key role in these interactions is played by processes of protein search for specifi…
Molecular search with conformational change: One-dimensional discrete-state stochastic model
Jaeoh Shin, Anatoly B. Kolomeisky
Molecular search phenomena are observed in a variety of chemical and biological systems. During the search the participating particles frequently move in complex inhomogeneous envi…
Kinetics of Protein-DNA Interactions: First-Passage Analysis
Maria P. Kochugaeva, Alexey A. Shvets, Anatoly B. Kolomeisky
All living systems can function only far away from equilibrium, and for this reason chemical kinetic methods are critically important for uncovering the mechanisms of biological pr…