About thiol derivatization and resolution of basic proteins in two-dimensional electrophoresis
arXiv:q-bio/0611079 · doi:10.1002/pmic.200300589
Abstract
The influence of thiol blocking on the resolution of basic proteins by two-dimensional electrophoresis was investigated. Cysteine blocking greatly increased resolution and decreased streaking, especially in the basic region of the gels. Two strategies for cysteine blocking were found to be efficient: classical alkylation with maleimide derivatives and mixed disulfide exchange with an excess of a low molecular weight disulfide. The effect on resolution was significant enough to allow correct resolution of basic proteins with in-gel rehydration on wide gradients (e.g. 3-10 and 4-12), but anodic cup-loading was still required for basic gradients (e.g. 6-12 or 8-12). These results demonstrate that thiol-related problems are not solely responsible for streaking of basic proteins on two-dimensional gels.
web publisher http://www.interscience.wiley.com
References in corpus (2)
Cited by in corpus (12)
- Two-dimensional gel electrophoresis in proteomics: A tutorial
- From secretome analysis to immunology: chitosan induces major alterations in the activation of dendritic cells via a TLR4-dependent mechanism
- Molecular responses of mouse macrophages to copper and copper oxide nanoparticles inferred from proteomic analyses
- Analysis of cellular responses of macrophages to zinc ions and zinc oxide nanoparticles: a combined targeted and proteomic approach
- Sweet silver: A formaldehyde-free silver staining using aldoses as developing agents, with enhanced compatibility with mass spectrometry
- Differential proteomics highlights macrophage-specific responses to amorphous silica nanoparticles
- Zinc oxide induces the stringent response and major reorientations in the central metabolism of Bacillus subtilis
- Variations on a theme: Changes to electrophoretic separations that can make a difference
- Mitochondrial proteomics: analysis of a whole mitochondrial extract with two-dimensional electrophoresis
- Ultrafast coelectrophoretic fluorescent staining of proteins with carbocyanines
- Two-dimensional SDS-PAGE fractionation of biological samples for biomarker discovery
- Improved proteomic analysis of nuclear proteins, as exemplified by the comparison of two myeloïd cell lines nuclear proteomes