Combining SchNet and SHARC: The SchNarc machine learning approach for excited-state dynamics
arXiv:2002.07264 · doi:10.1021/acs.jpclett.0c00527
Abstract
In recent years, deep learning has become a part of our everyday life and is revolutionizing quantum chemistry as well. In this work, we show how deep learning can be used to advance the research field of photochemistry by learning all important properties for photodynamics simulations. The properties are multiple energies, forces, nonadiabatic couplings and spin-orbit couplings. The nonadiabatic couplings are learned in a phase-free manner as derivatives of a virtually constructed property by the deep learning model, which guarantees rotational covariance. Additionally, an approximation for nonadiabatic couplings is introduced, based on the potentials, their gradients and Hessians. As deep-learning method, we employ SchNet extended for multiple electronic states. In combination with the molecular dynamics program SHARC, our approach termed SchNarc is tested on a model system and two realistic polyatomic molecules and paves the way towards efficient photodynamics simulations of complex systems.
References in corpus (30)
- Neural Message Passing for Quantum Chemistry
- Gaussian Approximation Potentials: the accuracy of quantum mechanics, without the electrons
- Machine learning and the physical sciences
- Deep Potential Molecular Dynamics: a scalable model with the accuracy of quantum mechanics
- SchNet - a deep learning architecture for molecules and materials
- DeePMD-kit: A deep learning package for many-body potential energy representation and molecular dynamics
- ANI-1: An extensible neural network potential with DFT accuracy at force field computational cost
- Quantum-Chemical Insights from Deep Tensor Neural Networks
- PhysNet: A Neural Network for Predicting Energies, Forces, Dipole Moments and Partial Charges
- Machine Learning Unifies the Modelling of Materials and Molecules
- Towards Exact Molecular Dynamics Simulations with Machine-Learned Force Fields
- Machine-learning based interatomic potential for amorphous carbon
- Machine Learning Molecular Dynamics for the Simulation of Infrared Spectra
- Machine learning a general purpose interatomic potential for silicon
- SchNetPack: A Deep Learning Toolbox For Atomistic Systems
- Hierarchical modeling of molecular energies using a deep neural network
- Automatic Selection of Atomic Fingerprints and Reference Configurations for Machine-Learning Potentials
- sGDML: Constructing Accurate and Data Efficient Molecular Force Fields Using Machine Learning
- Machine learning enables long time scale molecular photodynamics simulations
- Inclusion of machine learning kernel ridge regression potential energy surfaces in on-the-fly nonadiabatic molecular dynamics simulation
- Non-adiabatic Effects in the Dissociation of Oxygen Molecules at the Al(111) Surface
- Machine Learning Exciton Dynamics
- Operators in Machine Learning: Response Properties in Chemical Space
- Bayesian machine learning for quantum molecular dynamics
- Signatures of nonadiabatic O2 dissociation at Al(111): First-principles fewest-switches study
- Neural networks and kernel ridge regression for excited states dynamics of CHNH: From single-state to multi-state representations and multi-property machine learning models
- Comparing the Accuracy of High-Dimensional Neural Network Potentials and the Systematic Molecular Fragmentation Method: A Benchmark Study for all-trans Alkanes
- Symmetry-Adapted High Dimensional Neural Network Representation of Electronic Friction Tensor of Adsorbates on Metals
- Direct Mapping Hidden Excited State Interaction Patterns from ab initio Dynamics and Its Implications on Force Field Development
- Configuration Interaction Singles with Spin-Orbit Coupling: Constructing Spin-Adiabatic States and Their Analytical Nuclear Gradients
Cited by in corpus (40)
- Machine Learning Force Fields
- Atomistic Line Graph Neural Network for Improved Materials Property Predictions
- Machine learning for electronically excited states of molecules
- Perspective on integrating machine learning into computational chemistry and materials science
- A practical guide to machine learning interatomic potentials -- Status and future
- Quantum Machine Learning for Chemistry and Physics
- Representations of molecules and materials for interpolation of quantum-mechanical simulations via machine learning
- Neural Network Potentials for Chemistry: Concepts, Applications and Prospects
- Excited state, non-adiabatic dynamics of large photoswitchable molecules using a chemically transferable machine learning potential
- High-Dimensional Neural Network Potentials for Magnetic Systems Using Spin-Dependent Atom-Centered Symmetry Functions
- Efficient and Accurate Simulations of Vibrational and Electronic Spectra with Symmetry-Preserving Neural Network Models for Tensorial Properties
- High-throughput property-driven generative design of functional organic molecules
- Universal Machine Learning for the Response of Atomistic Systems to External Fields
- Deep Learning for UV Absorption Spectra with SchNarc: First Steps Towards Transferability in Chemical Compound Space
- Neural networks and kernel ridge regression for excited states dynamics of CHNH: From single-state to multi-state representations and multi-property machine learning models
- Physically inspired deep learning of molecular excitations and photoemission spectra
- Machine learning and excited-state molecular dynamics
- Roaming leads to amino acid photodamage: A deep learning study of tyrosine
- BuRNN: Buffer Region Neural Network Approach for Polarizable-Embedding Neural Network / Molecular Mechanics Simulations
- Accelerating Atomistic Simulations with Piecewise Machine Learned Ab Initio Potentials at Classical Force Field-like Cost
- MLatom software ecosystem for surface hopping dynamics in Python with quantum mechanical and machine learning methods
- Implementing graph neural networks with TensorFlow-Keras
- Fewest-Switches Surface Hopping with Long Short-Term Memory Networks
- UV-Visible Absorption Spectra of Solvated Molecules by Quantum Chemical Machine Learning
- Reinforcement learning for traversing chemical structure space: Optimizing transition states and minimum energy paths of molecules
- Improved decision making with similarity based machine learning: Applications in chemistry
- A Descriptor Is All You Need: Accurate Machine Learning of Nonadiabatic Coupling Vectors
- Exciting DeePMD: Learning excited state energies, forces, and non-adiabatic couplings
- Interpolating many-body wave functions for accelerated molecular dynamics on the near-exact electronic surface
- Machine Learning Framework for Modeling Exciton-Polaritons in Molecular Materials
- A simple approach to rotationally invariant machine learning of avector quantity
- Transformative Applications of Machine Learning for Chemical Reactions
- Ab initio machine learning in chemical compound space
- Accurate Prediction of Free Solvation Energy of Organic Molecules via Graph Attention Network and Message Passing Neural Network from Pairwise Atomistic Interactions
- Collaborative Goal Tracking of Multiple Mobile Robots Based on Geometric Graph Neural Network
- Orbital Mixer: Using Atomic Orbital Features for Basis Dependent Prediction of Molecular Wavefunctions
- Machine Learning Photodynamics Unveils a Controlled H Loss Channel in Methaniminium Cation
- REANN: A PyTorch-based End-to-End Multi-functional Deep Neural Network Package for Molecular, Reactive and Periodic Systems
- XMCQDPT2-Fidelity Transfer-Learning Potentials and a Wavepacket Oscillation Model with Power-Law Decay for Ultrafast Photodynamics
- HOAX: A Hyperparameter Optimization Algorithm Explorer for Neural Networks