Efficient nonparametric -body force fields from machine learning
arXiv:1801.04823 · doi:10.1103/PhysRevB.97.184307
Abstract
We provide a definition and explicit expressions for -body Gaussian Process (GP) kernels which can learn any interatomic interaction occurring in a physical system, up to -body contributions, for any value of . The series is complete, as it can be shown that the "universal approximator" squared exponential kernel can be written as a sum of -body kernels. These recipes enable the choice of optimally efficient force models for each target system, as confirmed by extensive testing on various materials. We furthermore describe how the -body kernels can be "mapped" on equivalent representations that provide database-size-independent predictions and are thus crucially more efficient. We explicitly carry out this mapping procedure for the first non-trivial (3-body) kernel of the series, and show that this reproduces the GP-predicted forces with accuracy while being orders of magnitude faster. These results open the way to using novel force models (here named "M-FFs") that are computationally as fast as their corresponding standard parametrised -body force fields, while retaining the nonparametric character, the ease of training and validation, and the accuracy of the best recently proposed machine learning potentials.
13 pages, 8 captioned figures
References in corpus (8)
- A Spectral Analysis Method for Automated Generation of Quantum-Accurate Interatomic Potentials
- Machine-learning based interatomic potential for amorphous carbon
- Alchemical and structural distribution based representation for improved QML
- Symmetry-Adapted Machine-Learning for Tensorial Properties of Atomistic Systems
- On the accuracy of the MB-pol many-body potential for water: Interaction energies, vibrational frequencies, and classical thermodynamic and dynamical properties from clusters to liquid water and ice
- Understanding molecular representations in machine learning: The role of uniqueness and target similarity
- A Machine Learning Potential for Graphene
- Non-covalent interactions across organic and biological subsets of chemical space: Physics-based potentials parametrized from machine learning
Cited by in corpus (66)
- Towards Exact Molecular Dynamics Simulations with Machine-Learned Force Fields
- On-the-fly machine learning force field generation: Application to melting points
- Physics-inspired structural representations for molecules and materials
- GPUMD: A package for constructing accurate machine-learned potentials and performing highly efficient atomistic simulations
- Machine-learning interatomic potentials for materials science
- FCHL revisited: faster and more accurate quantum machine learning
- Physically-informed artificial neural networks for atomistic modeling of materials
- sGDML: Constructing Accurate and Data Efficient Molecular Force Fields Using Machine Learning
- Machine learning force fields and coarse-grained variables in molecular dynamics: application to materials and biological systems
- Incorporating long-range physics in atomic-scale machine learning
- Accurate molecular polarizabilities with coupled-cluster theory and machine learning
- On the Completeness of Atomic Structure Representations
- Atom-Density Representations for Machine Learning
- Unsupervised machine learning in atomistic simulations, between predictions and understanding
- Fast and Accurate Uncertainty Estimation in Chemical Machine Learning
- Machine-learning interatomic potential for radiation damage and defects in tungsten
- Representations of molecules and materials for interpolation of quantum-mechanical simulations via machine learning
- Active learning of reactive Bayesian force fields: Application to heterogeneous hydrogen-platinum catalysis dynamics
- Feature Optimization for Atomistic Machine Learning Yields A Data-Driven Construction of the Periodic Table of the Elements
- QM7-X: A comprehensive dataset of quantum-mechanical properties spanning the chemical space of small organic molecules
- How to validate machine-learned interatomic potentials
- Molecular Force Fields with Gradient-Domain Machine Learning: Construction and Application to Dynamics of Small Molecules with Coupled Cluster Forces
- OrbNet Denali: A machine learning potential for biological and organic chemistry with semi-empirical cost and DFT accuracy
- A local Bayesian optimizer for atomic structures
- Using Gaussian Process Regression to Simulate the Vibrational Raman Spectra of Molecular Crystals
- Gaussian approximation potentials for body-centered-cubic transition metals
- Error-Controlled Exploration of Chemical Reaction Networks with Gaussian Processes
- PiNN: A Python Library for Building Atomic Neural Networks of Molecules and Materials
- Recursive evaluation and iterative contraction of -body equivariant features
- Data-driven simulation and characterisation of gold nanoparticle melting
- Simple machine-learned interatomic potentials for complex alloys
- Hierarchical Visualization of Materials Space with Graph Convolutional Neural Networks
- Phase Transitions of Zirconia: Machine-Learned Force Fields Beyond Density Functional Theory
- Universal QM/MM Approaches for General Nanoscale Applications
- Equivariant representations for molecular Hamiltonians and N-center atomic-scale properties
- Ranking the information content of distance measures
- Bayesian Force Fields from Active Learning for Simulation of Inter-Dimensional Transformation of Stanene
- Molecular Force Fields with Gradient-Domain Machine Learning (GDML): Comparison and Synergies with Classical Force Fields
- Challenges for Machine Learning Force Fields in Reproducing Potential Energy Surfaces of Flexible Molecules
- Building machine learning force fields for nanoclusters
- Efficient implementation of atom-density representations
- On Machine Learning Force Fields for Metallic Nanoparticles
- - phase transition of zirconium predicted by on-the-fly machine-learned force field
- Simulating solvation and acidity in complex mixtures with first-principles accuracy: the case of CHSOH and HO in phenol
- A New Kind of Atlas of Zeolite Building Blocks
- CIDER: An Expressive, Nonlocal Feature Set for Machine Learning Density Functionals with Exact Constraints
- Model-free quantification of completeness, uncertainties, and outliers in atomistic machine learning using information theory
- Completeness of Atomic Structure Representations
- Multiscale machine-learning interatomic potentials for ferromagnetic and liquid iron
- Navigating chemical reaction space with a steering wheel
- Compact atomic descriptors enable accurate predictions via linear models
- Indirect Learning of Interatomic Potentials for Accelerated Materials Simulations
- Efficacy of the Radial Pair Potential Approximation for Molecular Dynamics Simulations of Dense Plasmas
- Nonlocal Machine-Learned Exchange Functional for Molecules and Solids
- Machine-learning correction to density-functional crystal structure optimization
- Machine-learning of atomic-scale properties based on physical principles
- Mean-Field Density Matrix Decompositions
- Super-resolution in Molecular Dynamics Trajectory Reconstruction with Bi-Directional Neural Networks
- Segregation, ordering, and precipitation in WTaV-based concentrated refractory alloys
- Construction of Machine Learned Force Fields with Quantum Chemical Accuracy: Applications and Chemical Insights
- Building nonparametric -body force fields using Gaussian process regression
- Accurate Molecular Dynamics Enabled by Efficient Physically-Constrained Machine Learning Approaches
- Machine learning at the atomic-scale
- Modeling refractory high-entropy alloys with efficient machine-learned interatomic potentials: defects and segregation
- Towards Improved Quantum Machine Learning for Molecular Force Fields
- Unified theory of atom-centered representations and message-passing machine-learning schemes