paper

Umbrella sampling: a powerful method to sample tails of distributions

arXiv:1712.05024 · doi:10.1093/mnras/sty2140

Abstract

We present the umbrella sampling (US) technique and show that it can be used to sample extremely low probability areas of the posterior distribution that may be required in statistical analyses of data. In this approach sampling of the target likelihood is split into sampling of multiple biased likelihoods confined within individual umbrella windows. We show that the US algorithm is efficient and highly parallel and that it can be easily used with other existing MCMC samplers. The method allows the user to capitalize on their intuition and define umbrella windows and increase sampling accuracy along specific directions in the parameter space. Alternatively, one can define umbrella windows using an approach similar to parallel tempering. We provide a public code that implements umbrella sampling as a standalone python package. We present a number of tests illustrating the power of the US method in sampling low probability areas of the posterior and show that this ability allows a considerably more robust sampling of multi-modal distributions compared to the standard sampling methods. We also present an application of the method in a real world example of deriving cosmological constraints using the supernova type Ia data. We show that umbrella sampling can sample the posterior accurately down to the credible region in the plane, while for the same computational work the affine-invariant MCMC sampling implemented in the {\tt emcee} code samples the posterior reliably only to .

arXiv commentsubmitted to MNRAS, 10 pages, 6 figures. Code implementing the umbrella sampling method with examples of use is available at https://github.com/c-matthews/usample

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