Aviram-Ratner rectifying mechanism for DNA base pair sequencing through graphene nanogaps
arXiv:1201.0221 · doi:10.1088/0957-4484/23/13/135202
Abstract
We demonstrate that biological molecules such as Watson-Crick DNA base pairs can behave as biological Aviram-Ratner electrical rectifiers because of the spatial separation and weak hydrogen bonding between the nucleobases. We have performed a parallel computational implementation of the ab-initio non-equilibrium Green's function (NEGF) theory to determine the electrical response of graphene---base-pair---graphene junctions. The results show an asymmetric (rectifying) current-voltage response for the Cytosine-Guanine base pair adsorbed on a graphene nanogap. In sharp contrast we find a symmetric response for the Thymine-Adenine case. We propose applying the asymmetry of the current-voltage response as a sensing criterion to the technological challenge of rapid DNA sequencing via graphene nanogaps.
References in corpus (10)
- The SIESTA method for ab initio order-N materials simulation
- Efficient index handling of multidimensional periodic boundary conditions
- Self-passivating edge reconstructions of graphene
- Physical approaches to DNA sequencing and detection
- Fast DNA Sequencing via Transverse Electronic Transport
- Electronic signature of DNA nucleotides via transverse transport
- Physisorption of Nucleobases on Graphene
- Influence of the environment and probes on rapid DNA sequencing via transverse electronic transport
- Effect of Noise on DNA Sequencing via Transverse Electronic Transport
- Optical conductivity of wet DNA