Bethe-Peierls approximation and the inverse Ising model
arXiv:1112.3501 · doi:10.1088/1742-5468/2012/03/P03004
Abstract
We apply the Bethe-Peierls approximation to the problem of the inverse Ising model and show how the linear response relation leads to a simple method to reconstruct couplings and fields of the Ising model. This reconstruction is exact on tree graphs, yet its computational expense is comparable to other mean-field methods. We compare the performance of this method to the independent-pair, naive mean- field, Thouless-Anderson-Palmer approximations, the Sessak-Monasson expansion, and susceptibility propagation in the Cayley tree, SK-model and random graph with fixed connectivity. At low temperatures, Bethe reconstruction outperforms all these methods, while at high temperatures it is comparable to the best method available so far (Sessak-Monasson). The relationship between Bethe reconstruction and other mean- field methods is discussed.
References in corpus (4)
Cited by in corpus (28)
- Improved contact prediction in proteins: Using pseudolikelihoods to infer Potts models
- Inverse statistical problems: from the inverse Ising problem to data science
- Inverse Statistical Physics of Protein Sequences: A Key Issues Review
- Solving Statistical Mechanics Using Variational Autoregressive Networks
- Estimation of effective temperatures in quantum annealers for sampling applications: A case study with possible applications in deep learning
- The Bethe approximation for solving the inverse Ising problem: a comparison with other inference methods
- Restricted Boltzmann Machine, recent advances and mean-field theory
- Pseudolikelihood Decimation Algorithm Improving the Inference of the Interaction Network in a General Class of Ising Models
- Mean-field theory for the inverse Ising problem at low temperatures
- Learning and inference in a nonequilibrium Ising model with hidden nodes
- Large Pseudo-Counts and -Norm Penalties Are Necessary for the Mean-Field Inference of Ising and Potts Models
- Improving landscape inference by integrating heterogeneous data in the inverse Ising problem
- Detection of cheating by decimation algorithm
- Inferring effective couplings with Restricted Boltzmann Machines
- Adaptive Thouless-Anderson-Palmer approach to inverse Ising problems with quenched random fields
- Inference of the sparse kinetic Ising model using the decimation method
- A statistical physics approach to learning curves for the Inverse Ising problem
- Regularization and decimation pseudolikelihood approaches to statistical inference in -spin models
- Resummed mean-field inference for strongly coupled data
- Learning performance in inverse Ising problems with sparse teacher couplings
- Beyond inverse Ising model: structure of the analytical solution for a class of inverse problems
- A Density Consistency approach to the inverse Ising problem
- Sparse Hopfield network reconstruction with regularization
- Pairwise MRF Calibration by Perturbation of the Bethe Reference Point
- Explaining the effects of non-convergent sampling in the training of Energy-Based Models
- Structure Learning in Inverse Ising Problems Using -Regularized Linear Estimator
- Solving Non-parametric Inverse Problem in Continuous Markov Random Field using Loopy Belief Propagation
- Ising Model Selection Using -Regularized Linear Regression: A Statistical Mechanics Analysis