output
20052020
most citedDemixed principal component analysis of population activity in higher cortical areas reveals independent representation of task parameters

717 citations

20 papers

stat.ME2020★ 8 cited

Estimation of ascertainment bias and its effect on power in clinical trials with time-to-event outcomes

E. J. Greene, P. Peduzzi, J. Dziura +4

While the gold standard for clinical trials is to blind all parties -- participants, researchers, and evaluators -- to treatment assignment, this is not always a possibility. When…

eess.IV2019★ 198 cited

Multi-Contrast Super-Resolution MRI Through a Progressive Network

Qing Lyu, Hongming Shan, Ge Wang

Magnetic resonance imaging (MRI) is widely used for screening, diagnosis, image-guided therapy, and scientific research. A significant advantage of MRI over other imaging modalitie…

eess.IV2019★ 48 cited

Fully Automatic Liver Attenuation Estimation Combing CNN Segmentation and Morphological Operations

Yuankai Huo, James G. Terry, Jiachen Wang +5

Manually tracing regions of interest (ROIs) within the liver is the de facto standard method for measuring liver attenuation on computed tomography (CT) in diagnosing nonalcoholic…

cs.CV2019★ 58 cited

DC-AL GAN: Pseudoprogression and True Tumor Progression of Glioblastoma Multiform Image Classification Based on DCGAN and AlexNet

Meiyu Li, Hailiang Tang, Michael D. Chan +2

Pseudoprogression (PsP) occurs in 20-30% of patients with glioblastoma multiforme (GBM) after receiving the standard treatment. In the course of post-treatment magnetic resonance i…

stat.AP2018★ 160 cited

Epidemiologic analyses with error-prone exposures: Review of current practice and recommendations

Pamela A. Shaw, Veronika Deffner, Ruth H. Keogh +5

Background: Variables in epidemiological observational studies are commonly subject to measurement error and misclassification, but the impact of such errors is frequently not appr…

q-bio.NC2018★ 15 cited

Designing Patient-Specific Optimal Neurostimulation Patterns for Seizure Suppression

Roman A. Sandler, Kunling Geng, Dong Song +5

Neurostimulation is a promising therapy for abating epileptic seizures. However, it is extremely difficult to identify optimal stimulation patterns experimentally. In this study hu…

q-bio.BM2015★ 488 cited

Real-time shape approximation and 5-D fingerprinting of single proteins

Erik C. Yusko, Brandon R. Bruhn, Olivia Eggenberger +10

This work exploits the zeptoliter sensing volume of electrolyte-filled nanopores to determine, simultaneously and in real time, the approximate shape, volume, charge, rotational di…

physics.soc-ph2015★ 10 cited

Explosive percolation in thresholded networks

Satoru Hayasaka

Explosive percolation in a network is a phase transition where a large portion of nodes becomes connected with an addition of a small number of edges. Although extensively studied…

q-bio.NC2014★ 717 cited

Demixed principal component analysis of population activity in higher cortical areas reveals independent representation of task parameters

Dmitry Kobak, Wieland Brendel, Christos Constantinidis +7

Neurons in higher cortical areas, such as the prefrontal cortex, are known to be tuned to a variety of sensory and motor variables. The resulting diversity of neural tuning often o…

physics.med-ph2013

Top-level Design and Pilot Analysis of Low-end CT Scanners Based on Linear Scanning for Developing Countries

Fenglin Liu, Hengyong Yu, Wenxiang Cong +1

Purpose: The goal is to develop a new architecture for computed tomography (CT) which is at an ultra-low-dose for developing countries, especially in rural areas. Methods: The prop…

cs.CV2013

Dictionary-Learning-Based Reconstruction Method for Electron Tomography

Baodong Liu, Hengyong Yu, Scott S. Verbridge +2

Electron tomography usually suffers from so called missing wedge artifacts caused by limited tilt angle range. An equally sloped tomography (EST) acquisition scheme (which should b…

q-bio.MN2013★ 1 cited

Knowledge-fused differential dependency network models for detecting significant rewiring in biological networks

Ye Tian, Bai Zhang, Eric P. Hoffman +6

Modeling biological networks serves as both a major goal and an effective tool of systems biology in studying mechanisms that orchestrate the activities of gene products in cells.…

physics.med-ph2013★ 97 cited

Meaning of Interior Tomography

Ge Wang, Hengyong Yu

The classic imaging geometry for computed tomography is for collection of un-truncated projections and reconstruction of a global image, with the Fourier transform as the theoretic…

stat.ME2013★ 133 cited

Analyzing complex functional brain networks: fusing statistics and network science to understand the brain

Sean L. Simpson, F. DuBois Bowman, Paul J. Laurienti

Complex functional brain network analyses have exploded over the last eight years, gaining traction due to their profound clinical implications. The application of network science…

nlin.AO2011★ 1 cited

The ubiquity of small-world networks

Qawi K. Telesford, Karen E. Joyce, Satoru Hayasaka +2

Small-world networks by Watts and Strogatz are a class of networks that are highly clustered, like regular lattices, yet have small characteristic path lengths, like random graphs.…

nlin.AO2010★ 51 cited

Universal fractal scaling of self-organized networks

Paul J. Laurienti, Karen E. Joyce, Qawi K. Telesford +2

There is an abundance of literature on complex networks describing a variety of relationships among units in social, biological, and technological systems. Such networks, consistin…

stat.AP2010★ 137 cited

Exponential Random Graph Modeling for Complex Brain Networks

Sean L. Simpson, Satoru Hayasaka, Paul J. Laurienti

Exponential random graph models (ERGMs), also known as p* models, have been utilized extensively in the social science literature to study complex networks and how their global str…

nlin.CD2007★ 21 cited

Separatrices and basins of stability from time series data

Martin Tanaka, Shane D. Ross

An approach is presented for identifying separatrices in phase space generated from noisy time series data sets representative of measured experimental data. These separatrices are…

q-bio.NC2005★ 34 cited

Context-dependent selection of visuomotor maps

Emilio Salinas

Behavior results from the integration of ongoing sensory signals and contextual information in various forms, such as past experience, expectations, current goals, etc. Thus, the r…

q-bio.NC2005

When Response Variability Increases Neural Network Robustness to Synaptic Noise

Gleb Basalyga, Emilio Salinas

Cortical sensory neurons are known to be highly variable, in the sense that responses evoked by identical stimuli often change dramatically from trial to trial. The origin of this…