output
20112022
most citedLocalization of protein aggregation in Escherichia coli is governed by diffusion and nucleoid macromolecular crowding effect

146 citations

7 papers

cs.AI2022★ 2 cited

VCNet: A self-explaining model for realistic counterfactual generation

Victor Guyomard, Françoise Fessant, Thomas Guyet +2

Counterfactual explanation is a common class of methods to make local explanations of machine learning decisions. For a given instance, these methods aim to find the smallest modif…

stat.AP2020★ 18 cited

Understanding and monitoring the evolution of the Covid-19 epidemic from medical emergency calls: the example of the Paris area

Stéphane Gaubert, Marianne Akian, Xavier Allamigeon +16

We portray the evolution of the Covid-19 epidemic during the crisis of March-April 2020 in the Paris area, by analyzing the medical emergency calls received by the EMS of the four…

cs.NE2018★ 36 cited

The Surprising Creativity of Digital Evolution: A Collection of Anecdotes from the Evolutionary Computation and Artificial Life Research Communities

Joel Lehman, Jeff Clune, Dusan Misevic +50

Biological evolution provides a creative fount of complex and subtle adaptations, often surprising the scientists who discover them. However, because evolution is an algorithmic pr…

q-bio.GN2013★ 1 cited

The genome of the medieval Black Death agent (extended abstract)

Ashok Rajaraman, Eric Tannier, Cedric Chauve

The genome of a 650 year old Yersinia pestis bacteria, responsible for the medieval Black Death, was recently sequenced and assembled into 2,105 contigs from the main chromosome. A…

q-bio.CB2013★ 146 cited

Localization of protein aggregation in Escherichia coli is governed by diffusion and nucleoid macromolecular crowding effect

Anne-Sophie Coquel, Jean-Pascal Jacob, Maël Primet +6

Aggregates of misfolded proteins are a hallmark of many age-related diseases. Recently, they have been linked to aging of Escherichia coli (E. coli) where protein aggregates accumu…

q-bio.QM2012★ 37 cited

Anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium

Hédi Soula, Bertrand Caré, Guillaume Beslon +1

Measurements of protein motion in living cells and membranes consistently report transient anomalous diffusion (subdiffusion) which converges back to a Brownian motion with reduced…

q-bio.NC2011★ 129 cited

A tale of two stories: astrocyte regulation of synaptic depression and facilitation

Maurizio De Pittà, Vladislav Volman, Hugues Berry +1

Short-term presynaptic plasticity designates variations of the amplitude of synaptic information transfer whereby the amount of neurotransmitter released upon presynaptic stimulati…