output
20182026
most citedPhysical Principles of Retroviral Integration in the Human Genome

66 citations

10 papers

physics.optics2026★ 2 cited

Free-electron laser-based extended wide-field mid-infrared photothermal imaging for biomedical and microplastic analysis

Anooj Thayyil Raveendran, Subham Adak, Artem Shydliukh +8

Wide-field mid-infrared photothermal (MIP) imaging offers rapid labelfree chemical contrast for biomedical and polymer analysis. However, its field of view (FOV) is limited by the…

physics.med-ph2025★ 19 cited

SynthRAD2025 Grand Challenge dataset: generating synthetic CTs for radiotherapy

Adrian Thummerer, Erik van der Bijl, Arthur Jr Galapon +16

Medical imaging is essential in modern radiotherapy, supporting diagnosis, treatment planning, and monitoring. Synthetic imaging, particularly synthetic computed tomography (sCT),…

q-bio.CB2025★ 4 cited

Three-dimensional chiral active Ornstein-Uhlenbeck model for helical motion of microorganisms

Leon Lettermann, Falko Ziebert, Mirko Singer +2

Active movement is essential for the survival of microorganisms like bacteria, algae and unicellular parasites. In three dimensions, both swimming and gliding microorganisms often…

cs.LG2024★ 2 cited

Machine Unlearning for Speaker-Agnostic Detection of Gender-Based Violence Condition in Speech

Emma Reyner-Fuentes, Esther Rituerto-Gonzalez, Carmen Pelaez-Moreno

Gender-based violence is a pervasive public health issue that severely impacts women's mental health, often leading to conditions such as in anxiety, depression, post-traumatic str…

cs.CL2024★ 10 cited

Clinical information extraction for Low-resource languages with Few-shot learning using Pre-trained language models and Prompting

Phillip Richter-Pechanski, Philipp Wiesenbach, Dominic M. Schwab +4

Automatic extraction of medical information from clinical documents poses several challenges: high costs of required clinical expertise, limited interpretability of model predictio…

cs.LG2023★ 6 cited

Incorporating temporal dynamics of mutations to enhance the prediction capability of antiretroviral therapy's outcome for HIV-1

Giulia Di Teodoro, Martin Pirkl, Francesca Incardona +6

Motivation: In predicting HIV therapy outcomes, a critical clinical question is whether using historical information can enhance predictive capabilities compared with current or la…

physics.med-ph2020★ 48 cited

Investigation of superspreading COVID-19 outbreaks events in meat and poultry processing plants in Germany: A cross-sectional study

Roman Pokora, Susan Kutschbach, Matthias Weigl +11

Since May 2020, several COVID-19 outbreaks have occurred in the German meat industry despite various protective measures, and temperature and ventilation conditions were considered…

stat.AP2020

Assessing Excess Mortality in Times of Pandemics Based on Principal Component Analysis of Weekly Mortality Data -- The Case of COVID-19

Patrizio Vanella, Ugofilippo Basellini, Berit Lange

The current outbreak of COVID-19 has called renewed attention to the need for sound statistical analysis for monitoring mortality patterns and trends over time. Excess mortality ha…

q-bio.PE2020★ 3 cited

Predicting in vivo escape dynamics of HIV-1 from a broadly neutralizing antibody

Matthijs Meijers, Kanika Vanshylla, Henning Gruell +2

Broadly neutralizing antibodies are promising candidates for treatment and prevention of HIV-1 infections. Such antibodies can temporarily suppress viral load in infected individua…

q-bio.SC2018★ 66 cited

Physical Principles of Retroviral Integration in the Human Genome

Davide Michieletto, Marina Lusic, Davide Marenduzzo +1

Certain retroviruses, including HIV, insert their DNA in a non-random fraction of the host genome via poorly understood selection mechanisms. Here, we develop a biophysical model f…