474 citations
Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.
- Queensland University of TechnologyAU4 papers
- Cardiff UniversityGB2 papers
- Aalborg UniversityDK1 paper
- Allen Institute for Cell ScienceUS1 paper
- Ames Research CenterUS1 paper
- Australian Prostate CentreAU1 paper
- Baker Heart and Diabetes InstituteAU1 paper
- Broad InstituteUS1 paper
- Carl Zeiss (Germany)DE1 paper
- Centre for Genomic RegulationES1 paper
- Centre for Human Drug ResearchNL1 paper
- China Jiliang UniversityCN1 paper
8 papers
GlobDB: A comprehensive species-dereplicated microbial genome resource
Daan R. Speth, Nick Pullen, Samuel T. N. Aroney +5
Over the past years, substantial numbers of microbial species' genomes have been deposited outside of conventional INSDC databases. The GlobDB aggregates 14 independent genomic cat…
CoverM: Read alignment statistics for metagenomics
Samuel T. N. Aroney, Rhys J. P. Newell, Jakob N. Nissen +3
Genome-centric analysis of metagenomic samples is a powerful method for understanding the function of microbial communities. Calculating read coverage is a central part of analysis…
Measuring photon correlation using imperfect detectors
Rachel N. Clark, Sam G. Bishop, Joseph K. Cannon +4
Single-photon detectors are ``blind" after the detection of a photon, and thereafter display a characteristic recovery in efficiency, during which the number of undetected photons…
Photo-dynamics of quantum emitters in aluminum nitride
Yanzhao Guo, John P. Hadden, Rachel N. Clark +2
Aluminum nitride is a technologically important wide bandgap semiconductor which has been shown to host bright quantum emitters. In this paper, we probe the photodynamics of quantu…
Community-developed checklists for publishing images and image analysis
Christopher Schmied, Michael Nelson, Sergiy Avilov +51
Images document scientific discoveries and are prevalent in modern biomedical research. Microscopy imaging in particular is currently undergoing rapid technological advancements. H…
Unlocking capacities of viral genomics for the COVID-19 pandemic response
Sergey Knyazev, Karishma Chhugani, Varuni Sarwal +19
More than any other infectious disease epidemic, the COVID-19 pandemic has been characterized by the generation of large volumes of viral genomic data at an incredible pace due to…
Evaluation of Logistic Regression Applied to Respondent-Driven Samples: Simulated and Real Data
Sandro Sperandei, Leonardo S. Bastos, Marcelo Ribeiro-Alves +2
Objective: To investigate the impact of different logistic regression estimators applied to RDS samples obtained by simulation and real data. Methods: Four simulated populations we…
Exclusion zone phenomena in water -- a critical review of experimental findings and theories
Daniel C. Elton, Peter D. Spencer, James D. Riches +1
The existence of the exclusion zone (EZ), a layer of water in which plastic microspheres are repelled from hydrophilic surfaces, has now been independently demonstrated by several…