output
20042025
most citedA bacterial ratchet motor

710 citations

19 papers

cs.LG2025

Energy-Efficient Federated Learning via Adaptive Encoder Freezing for MRI-to-CT Conversion: A Green AI-Guided Research

Ciro Benito Raggio, Lucia Migliorelli, Nils Skupien +6

Federated Learning (FL) holds the potential to advance equality in health by enabling diverse institutions to collaboratively train deep learning (DL) models, even with limited dat…

physics.med-ph2025★ 1 cited

A Privacy-Preserving Federated Learning Framework for Generalizable CBCT to Synthetic CT Translation in Head and Neck

Ciro Benito Raggio, Paolo Zaffino, Maria Francesca Spadea

Shortened Abstract Cone-beam computed tomography (CBCT) has become a widely adopted modality for image-guided radiotherapy (IGRT). However, CBCT suffers from increased noise, limit…

eess.IV2024★ 17 cited

FedSynthCT-Brain: A Federated Learning Framework for Multi-Institutional Brain MRI-to-CT Synthesis

Ciro Benito Raggio, Mathias Krohmer Zabaleta, Nils Skupien +6

The generation of Synthetic Computed Tomography (sCT) images has become a pivotal methodology in modern clinical practice, particularly in the context of Radiotherapy (RT) treatmen…

q-bio.BM2024★ 65 cited

The need to implement FAIR principles in biomolecular simulations

Rommie Amaro, Johan Åqvist, Ivet Bahar +125

This letter illustrates the opinion of the molecular dynamics (MD) community on the need to adopt a new FAIR paradigm for the use of molecular simulations. It highlights the necess…

q-bio.MN2023★ 108 cited

Current and future directions in network biology

Marinka Zitnik, Michelle M. Li, Aydin Wells +34

Network biology is an interdisciplinary field bridging computational and biological sciences that has proved pivotal in advancing the understanding of cellular functions and diseas…

physics.med-ph2022★ 3 cited

F-PSMA-1007 salivary gland dosimetry: Comparison between different methods for dose calculation and assessment of inter- and intra-patient variability

Daniele Pistone, Silvano Gnesin, Lucrezia Auditore +4

Dosimetry of salivary glands (SGs) is usually implemented using simplified calculation approaches and approximated geometries. Our aims were to compare different dosimetry methods…

q-bio.BM2021★ 31 cited

Analyzing Host-Viral Interactome of SARS-CoV-2 for Identifying Vulnerable Host Proteins during COVID-19 Pathogenesis

Jayanta Kumar Das, Swarup Roy, Pietro Hiram Guzzi

The development of therapeutic targets for COVID-19 treatment is based on the understanding of the molecular mechanism of pathogenesis. The identification of genes and proteins inv…

physics.chem-ph2021★ 13 cited

Multi-replica biased sampling for photoswitchable pi-conjugated polymers

Mariagrazia Fortino, Concetta Cozza, Massimiliano Bonomi +1

In recent years, pi-conjugated polymers are attracting considerable interest in view of their light-dependent torsional reorganization around the pi-conjugated backbone, which dete…

physics.med-ph2021★ 204 cited

Deep learning-based synthetic-CT generation in radiotherapy and PET: a review

Maria Francesca Spadea, Matteo Maspero, Paolo Zaffino +1

Recently, deep learning (DL)-based methods for the generation of synthetic computed tomography (sCT) have received significant research attention as an alternative to classical one…

physics.med-ph2020★ 40 cited

Extracting quantitative biological information from brightfield cell images using deep learning

Saga Helgadottir, Benjamin Midtvedt, Jesús Pineda +5

Quantitative analysis of cell structures is essential for biomedical and pharmaceutical research. The standard imaging approach relies on fluorescence microscopy, where cell struct…

cs.DS2020★ 6 cited

Extracting Dense and Connected Subgraphs in Dual Networks by Network Alignment

Pietro Hiram Guzzi, Emanuel Salerno, Giuseppe Tradigo +1

The use of network based approaches to model and analyse large datasets is currently a growing research field. For instance in biology and medicine, networks are used to model inte…

physics.optics2017★ 7 cited

Shortcut to adiabaticity in full-wave optics for ultra-compact waveguide junctions

Giuseppe Della Valle, Gerardo Perozziello, Stefano Longhi

We extend the concept of shortcut to adiabaticity to full-wave optics and provide application to the design of an ultra-compact waveguide junction. In particular, we introduce a pr…

eess.SY2017★ 1 cited

Optimal Control of Uncertain Nonlinear Quadratic Systems with Constrained Inputs

Merola Alessio, Cosentino Carlo, Colacino Domenico +1

This paper addresses the problem of robust and optimal control for the class of nonlinear quadratic systems subject to norm-bounded parametric uncertainties and disturbances, and i…

q-bio.MN2013

Thresholding of Semantic Similarity Networks using a Spectral Graph Based Technique

Pietro Hiram Guzzi, Simone Truglia, Pierangelo Veltri +1

Semantic similarity measures (SSMs) refer to a set of algorithms used to quantify the similarity of two or more terms belonging to the same ontology. Ontology terms may be associat…

physics.optics2012★ 107 cited

Nonlinear graphene metamaterial

Andrey E. Nikolaenko, Nikitas Papasimakis, Evangelos Atmatzakis +6

We demonstrate that the broadband nonlinear optical response of graphene can be resonantly enhanced by more than an order of magnitude through hybridization with a plasmonic metama…

physics.optics2009★ 326 cited

Phase-change chalcogenide glass metamaterial

Z. L. Samson, K. F. MacDonald, F. De Angelis +5

Combining metamaterials with functional media brings a new dimension to their performance. Here we demonstrate substantial resonance frequency tuning in a photonic metamaterial hyb…

physics.optics2009★ 144 cited

Giant nonlinearity of carbon nanotubes in a photonic metamaterial

Andrey E. Nikolaenko, Francesco De Angelis, Stuart A. Boden +4

Metamaterials, artificial media structured on the subwavelength scale offer a rich paradigm for developing unique photonic functionalities ranging from negative index of refraction…

cond-mat.stat-mech2009★ 710 cited

A bacterial ratchet motor

R. Di Leonardo, L. Angelani, G. Ruocco +6

Self-propelling bacteria are a dream of nano-technology. These unicellular organisms are not just capable of living and reproducing, but they can swim very efficiently, sense the e…

quant-ph2004★ 22 cited

Electronic and center of mass transitions driven by Laguerre-Gaussian beams

A. Alexandrescu, E. di Fabrizio, D. Cojoc

We derive the interaction Hamiltonian of a Laguerre-Gaussian beam with a simple atomic system, under the assumption of a small spread of the center of mass wave function in compari…