output
20162024
most citedPromise and pitfalls of g-ratio estimation with MRI

151 citations

11 papers

astro-ph.CO2024★ 1 cited

Robustness of Neural Ratio and Posterior Estimators to Distributional Shifts for Population-Level Dark Matter Analysis in Strong Gravitational Lensing

Andreas Filipp, Yashar Hezaveh, Laurence Perreault-Levasseur

We investigate the robustness of Neural Ratio Estimators (NREs) and Neural Posterior Estimators (NPEs) to distributional shifts in the context of measuring the abundance of dark ma…

q-bio.GN2024★ 1 cited

The Canadian VirusSeq Data Portal & Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology

Erin E. Gill, Baofeng Jia, Carmen Lia Murall +67

The COVID-19 pandemic led to a large global effort to sequence SARS-CoV-2 genomes from patient samples to track viral evolution and inform public health response. Millions of SARS-…

eess.IV2024★ 27 cited

Towards Transcranial 3D Ultrasound Localization Microscopy of the Nonhuman Primate Brain

Paul Xing, Vincent Perrot, Adan Ulises Dominguez-Vargas +3

Hemodynamic changes occur in stroke and neurodegenerative diseases. Developing imaging techniques allowing the in vivo visualization and quantification of cerebral blood flow would…

eess.IV2024★ 2 cited

Pruning Sparse Tensor Neural Networks Enables Deep Learning for 3D Ultrasound Localization Microscopy

Brice Rauby, Paul Xing, Jonathan Porée +2

Ultrasound Localization Microscopy (ULM) is a non-invasive technique that allows for the imaging of micro-vessels in vivo, at depth and with a resolution on the order of ten micron…

physics.med-ph2023★ 9 cited

Sparse channel sampling for ultrasound localization microscopy (SPARSE-ULM)

Erwan Hardy, Jonathan Poree, Hatim Belgharbi +3

Ultrasound Localization Microscopy (ULM) has recently enabled the mapping of the cerebral vasculature in vivo with a resolution ten times smaller than the wavelength used, down to…

physics.med-ph2023★ 3 cited

Equivalent Time Active Cavitation Imaging

Simon Blais, Jonathan Poree, Gerardo Ramos-Palacios +4

The development of neurologically active drugs faces a challenge in treating brain diseases due to the blood-brain barrier's impermeability. High-intensity focused ultrasound can o…

cs.CV2023★ 98 cited

A Deep Learning Framework for Spatiotemporal Ultrasound Localization Microscopy

Léo Milecki, Jonathan Porée, Hatim Belgharbi +6

Ultrasound Localization Microscopy can resolve the microvascular bed down to a few micrometers. To achieve such performance microbubble contrast agents must perfuse the entire micr…

physics.med-ph2023

Equivalent-Time-Active-Cavitation-Imaging Enables Vascular-Resolution Blood-Brain-Barrier-Opening-Therapy Planning

Samuel Desmarais, Gerardo Ramos-Palacios, Jonathan Poree +4

Linking cavitation and anatomy was found to be important for predictable outcomes in Focused-Ultrasound Blood-Brain-Barrier-Opening and requires high resolution cavitation mapping.…

cs.LG2018

Planning in Dynamic Environments with Conditional Autoregressive Models

Johanna Hansen, Kyle Kastner, Aaron Courville +1

We demonstrate the use of conditional autoregressive generative models (van den Oord et al., 2016a) over a discrete latent space (van den Oord et al., 2017b) for forward planning w…

physics.med-ph2017★ 151 cited

Promise and pitfalls of g-ratio estimation with MRI

Jennifer S. W. Campbell, Ilana R. Leppert, Mathieu Boudreau +5

The fiber g-ratio is the ratio of the inner to the outer diameter of the myelin sheath of a myelinated axon. It has a limited dynamic range in healthy white matter, as it is optimi…

cs.LG2016★ 10 cited

Diet Networks: Thin Parameters for Fat Genomics

Adriana Romero, Pierre Luc Carrier, Akram Erraqabi +7

Learning tasks such as those involving genomic data often poses a serious challenge: the number of input features can be orders of magnitude larger than the number of training exam…