output
20132024
most citedSOAPdenovo-Trans: De novo transcriptome assembly with short RNA-Seq reads

72 citations

11 papers

cs.RO2024★ 13 cited

A Magnetic Millirobot Walks on Slippery Biological Surfaces for Targeted Cargo Delivery

Moonkwang Jeong, Xiangzhou Tan, Felix Fischer +1

Small-scale robots hold great potential for targeted cargo delivery in minimally-inv asive medicine. However, current robots often face challenges to locomote efficiently on slip p…

eess.IV2023★ 72 cited

VisionFM: a Multi-Modal Multi-Task Vision Foundation Model for Generalist Ophthalmic Artificial Intelligence

Jianing Qiu, Jian Wu, Hao Wei +39

We present VisionFM, a foundation model pre-trained with 3.4 million ophthalmic images from 560,457 individuals, covering a broad range of ophthalmic diseases, modalities, imaging…

physics.optics2023★ 19 cited

Single-shot quantitative differential phase contrast imaging combined with programmable polarization multiplexing illumination

Siying Liu, Chuanjian Zheng, Qun Hao +2

We propose a single-shot quantitative differential phase contrast (DPC) method with polarization multiplexing illumination. In the illumination module of our system, the programmab…

eess.IV2022★ 10 cited

Automatic reorientation by deep learning to generate short axis SPECT myocardial perfusion images

Fubao Zhu, Guojie Wang, Chen Zhao +6

Single photon emission computed tomography (SPECT) myocardial perfusion images (MPI) can be displayed both in traditional short-axis (SA) cardiac planes and polar maps for interpre…

eess.IV2022

Preparing data for pathological artificial intelligence with clinical-grade performance

Yuanqing Yang, Kai Sun, Yanhua Gao +2

[Purpose] The pathology is decisive for disease diagnosis, but relies heavily on the experienced pathologists. Recently, pathological artificial intelligence (PAI) is thought to im…

cs.CL2021★ 19 cited

More but Correct: Generating Diversified and Entity-revised Medical Response

Bin Li, Encheng Chen, Hongru Liu +5

Medical Dialogue Generation (MDG) is intended to build a medical dialogue system for intelligent consultation, which can communicate with patients in real-time, thereby improving t…

cs.CV2021★ 1 cited

Colorectal Polyp Detection in Real-world Scenario: Design and Experiment Study

Xinzi Sun, Dechun Wang, Chenxi Zhang +6

Colorectal polyps are abnormal tissues growing on the intima of the colon or rectum with a high risk of developing into colorectal cancer, the third leading cause of cancer death w…

physics.med-ph2020★ 45 cited

Semantic Segmentation Using Deep Learning to Extract Total Extraocular Muscles and Optic Nerve from Orbital Computed Tomography Images

Fubao Zhu, Zhengyuan Gao, Chen Zhao +7

Objectives: Precise segmentation of total extraocular muscles (EOM) and optic nerve (ON) is essential to assess anatomical development and progression of thyroid-associated ophthal…

cs.CV2018★ 26 cited

Pathological Evidence Exploration in Deep Retinal Image Diagnosis

Yuhao Niu, Lin Gu, Feng Lu +7

Though deep learning has shown successful performance in classifying the label and severity stage of certain disease, most of them give few evidence on how to make prediction. Here…

q-bio.NC2014★ 37 cited

A brain-wide association study of DISC1 genetic variants reveals a relationship with the structure and functional connectivity of the precuneus in schizophrenia

Xiaohong Gong, Wenlian Lu, Keith M. Kendrick +7

The Disrupted in Schizophrenia Gene 1 (DISC1) plays a role in both neural signalling and development and is associated with schizophrenia, although its links to altered brain struc…

q-bio.GN2013★ 72 cited

SOAPdenovo-Trans: De novo transcriptome assembly with short RNA-Seq reads

Yinlong Xie, Gengxiong Wu, Jingbo Tang +13

Motivation: Transcriptome sequencing has long been the favored method for quickly and inexpensively obtaining the sequences for a large number of genes from an organism with no ref…