output
20022024
most citedSimultaneous whole-animal 3D-imaging of neuronal activity using light field microscopy

850 citations

17 papers

physics.optics2024★ 6 cited

Point-Spread-Function Engineering in MINFLUX: Optimality of Donut and Half-Moon Excitation Patterns

Yan Liu, Jonathan Dong, Juan Augusto Maya +2

Localization microscopy enables imaging with resolutions that surpass the conventional optical diffraction limit. Notably, the MINFLUX method achieves super-resolution by shaping t…

cs.CL2024★ 4 cited

Predicting drug-gene relations via analogy tasks with word embeddings

Hiroaki Yamagiwa, Ryoma Hashimoto, Kiwamu Arakane +6

Natural language processing (NLP) is utilized in a wide range of fields, where words in text are typically transformed into feature vectors called embeddings. BioConceptVec is a sp…

cs.LG2023★ 7 cited

FakET: Simulating Cryo-Electron Tomograms with Neural Style Transfer

Pavol Harar, Lukas Herrmann, Philipp Grohs +1

In cryo-electron microscopy, accurate particle localization and classification are imperative. Recent deep learning solutions, though successful, require extensive training data se…

physics.optics2021★ 100 cited

Enhanced optical trapping via structured scattering

Michael A Taylor, Muhammad Waleed, Alexander B Stilgoe +2

Interferometry can completely redirect light, providing the potential for strong and controllable optical forces. However, small particles do not naturally act like interferometric…

q-bio.OT2021★ 63 cited

QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy

Glyn Nelson, Ulrike Boehm, Steve Bagley +97

In April 2020, the QUality Assessment and REProducibility for Instruments and Images in Light Microscopy (QUAREP-LiMi) initiative was formed. This initiative comprises imaging scie…

q-bio.TO2018★ 25 cited

Spontaneous symmetry breaking and pattern formation of organoids

Keisuke Ishihara, Elly M. Tanaka

Recent 3D organ reconstitution studies show that a group of stem cells can establish a body axis and acquire different fates in a spatially organized manner. How such symmetry brea…

physics.bio-ph2018★ 120 cited

A guide to emerging technologies for large-scale and whole brain optical imaging of neuronal activity

Siegfried Weisenburger, Alipasha Vaziri

The mammalian brain is a densely interconnected network that consists of millions to billions of neurons. Decoding how information is represented and processed by this neural circu…

physics.optics2016★ 4 cited

Evanescent single-molecule biosensing with quantum limited precision

N. P. Mauranyapin, L. S. Madsen, M. A. Taylor +2

Sensors that are able to detect and track single unlabelled biomolecules are an important tool both to understand biomolecular dynamics and interactions at nanoscale, and for medic…

physics.optics2015★ 20 cited

Optimizing and extending light-sculpting microscopy for fast functional imaging in neuroscience

Peter Rupprecht, Robert Prevedel, Florian Groessl +2

A number of questions in systems biology such as understanding how dynamics of neuronal networks are related to brain function require the ability to capture the functional dynamic…

quant-ph2014★ 2 cited

Quantum metrology and its application in biology

Michael A. Taylor, Warwick P. Bowen

Quantum metrology provides a route to overcome practical limits in sensing devices. It holds particular relevance to biology, where sensitivity and resolution constraints restrict…

q-bio.NC2014★ 358 cited

Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light

Tina Schrödel, Robert Prevedel, Karin Aumayr +2

Recent efforts in neuroscience research seek to obtain detailed anatomical neuronal wiring maps as well as information on how neurons in these networks engage in dynamic activities…

quant-ph2014★ 148 cited

Protecting a Spin Ensemble against Decoherence in the Strong-Coupling Regime of Cavity QED

Stefan Putz, Dmitry O. Krimer, Robert. Amsüss +5

Hybrid quantum systems based on spin ensembles coupled to superconducting microwave cavities are promising candidates for robust experiments in cavity quantum electrodynamics (QED)…

physics.optics2014★ 850 cited

Simultaneous whole-animal 3D-imaging of neuronal activity using light field microscopy

R. Prevedel, Y. -G. Yoon, M. Hoffmann +8

3D functional imaging of neuronal activity in entire organisms at single cell level and physiologically relevant time scales faces major obstacles due to trade-offs between the siz…

quant-ph2013★ 160 cited

Quantum computing on encrypted data

K. Fisher, A. Broadbent, L. K. Shalm +5

The ability to perform computations on encrypted data is a powerful tool for protecting privacy. Recently, protocols to achieve this on classical computing systems have been found.…

quant-ph2013★ 131 cited

Experimental Three-Particle Quantum Nonlocality under Strict Locality Conditions

C. Erven, E. Meyer-Scott, K. Fisher +13

Quantum correlations are critical to our understanding of nature, with far-reaching technological and fundamental impact. These often manifest as violations of Bell's inequalities,…

physics.chem-ph2011★ 42 cited

Vibrational excitons in ionophores: Experimental probes for quantum coherence-assisted ion transport and selectivity in ion channels

Ziad Ganim, Andrei Tokmakoff, Alipasha Vaziri

Despite a large body of work, the exact molecular details underlying ion-selectivity and transport in the potassium channel have not been fully laid to rest. One major reason has b…

cond-mat2002★ 30 cited

Anomalous diffusion on dynamical networks: A model for interacting epithelial cell migration

Stefan Thurner, Nikolaus Wick, Rudolf Hanel +2

We propose a model for cell migration where epithelial cells are able to detect trajectories of other cells and try to follow them. As cells move along in 2D cell culture, they mar…