output
20112024
most citedPractical considerations for specifying a super learner

134 citations

10 papers

stat.ME2024★ 3 cited

Assessing treatment effects in observational data with missing confounders: A comparative study of practical doubly-robust and traditional missing data methods

Brian D. Williamson, Chloe Krakauer, Eric Johnson +13

In pharmacoepidemiology, safety and effectiveness are frequently evaluated using readily available administrative and electronic health records data. In these settings, detailed co…

stat.AP2022

Applications of Machine Learning in Pharmacogenomics: Clustering Plasma Concentration-Time Curves

Jackson P. Lautier, Stella Grosser, Jessica Kim +2

Pharmaceutical researchers are continually searching for techniques to improve both drug development processes and patient outcomes. An area of recent interest is the potential for…

q-bio.QM2022

Learning diffusion coefficients, kinetic parameters, and the number of underlying states from a multi-state diffusion process: robustness results and application to PDK1/PKC, dynamics

Lewis R. Baker, Moshe T. Gordon, Brian P. Ziemba +3

Systems driven by Brownian motion are ubiquitous. A prevailing challenge is inferring, from data, the diffusion and kinetic parameters that describe these stochastic processes. In…

stat.ME2022★ 134 cited

Practical considerations for specifying a super learner

Rachael V. Phillips, Mark J. van der Laan, Hana Lee +1

Common tasks encountered in epidemiology, including disease incidence estimation and causal inference, rely on predictive modeling. Constructing a predictive model can be thought o…

stat.ME2020★ 1 cited

Optimal Bayesian hierarchical model to accelerate the development of tissue-agnostic drugs and basket trials

Liyun Jiang, Lei Nie, Fangrong Yan +1

Tissue-agnostic trials enroll patients based on their genetic biomarkers, not tumor type, in an attempt to determine if a new drug can successfully treat disease conditions based o…

stat.ME2020★ 1 cited

Hi3+3: A Model-Assisted Dose-Finding Design Borrowing Historical Data

Yunshan Duan, Sue-Jane Wang, Yuan Ji

Background -- In phase I clinical trials, historical data may be available through multi-regional programs, reformulation of the same drug, or previous trials for a drug under the…

stat.ME2020★ 5 cited

Elastic Priors to Dynamically Borrow Information from Historical Data in Clinical Trials

Liyun Jiang, Lei Nie, Ying Yuan

Use of historical data and real-world evidence holds great potential to improve the efficiency of clinical trials. One major challenge is how to effectively borrow information from…

q-bio.QM2017★ 21 cited

Estimating and interpreting secondary attack risk: Binomial considered harmful

Yushuf Sharker, Eben Kenah

The household secondary attack risk (SAR), often called the secondary attack rate or secondary infection risk, is the probability of infectious contact from an infectious household…

stat.AP2015★ 17 cited

The use of covariates and random effects in evaluating predictive biomarkers under a potential outcome framework

Zhiwei Zhang, Lei Nie, Guoxing Soon +1

Predictive or treatment selection biomarkers are usually evaluated in a subgroup or regression analysis with focus on the treatment-by-marker interaction. Under a potential outcome…

astro-ph.IM2011★ 42 cited

Accounting for Calibration Uncertainties in X-ray Analysis: Effective Areas in Spectral Fitting

Hyunsook Lee, Vinay L. Kashyap, David A. van Dyk +9

While considerable advance has been made to account for statistical uncertainties in astronomical analyses, systematic instrumental uncertainties have been generally ignored. This…