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20142026
most citedA new Standard DNA damage (SDD) data format

77 citations

Showing physics.chem-phShow all

8 papers · 1 filter

physics.chem-ph2023★ 44 cited

Condensed Matter Systems Exposed to Radiation: Multiscale Theory, Simulations, and Experiment

Andrey V. Solov'yov, Alexey V. Verkhovtsev, Nigel J. Mason +20

This paper reviews the new highly interdisciplinary research field studying the behavior of condensed matter systems exposed to radiation. The paper highlights several relevant exa…

physics.chem-ph2023★ 1 cited

Topical Issue "Dynamics of Systems on the Nanoscale (2021)". Editorial

Alexey V. Verkhovtsev, Vincenzo Guidi, Nigel J. Mason +1

Exploration of the structure formation and dynamics of animate and inanimate matter on the nanometer scale is a highly interdisciplinary field of rapidly emerging research. It is r…

physics.chem-ph2022★ 8 cited

Role of the molecular environment in quenching the irradiation-driven fragmentation of Fe(CO): a reactive molecular dynamics study

Benjamin Andreides, Alexey V. Verkhovtsev, Juraj Fedor +1

Irradiation-driven fragmentation and chemical transformations of molecular systems play a key role in nanofabrication processes where organometallic compounds break up due to the i…

physics.chem-ph2021★ 15 cited

Irradiation driven molecular dynamics: A review

Alexey V. Verkhovtsev, Ilia A. Solov'yov, Andrey V. Solov'yov

This paper reviews Irradiation Driven Molecular Dynamics (IDMD) - a novel computational methodology for atomistic simulations of the irradiation driven transformations of complex m…

physics.chem-ph2021★ 10 cited

Irradiation driven molecular dynamics simulation of the FEBID process for Pt(PF)

Alexey Prosvetov, Alexey V. Verkhovtsev, Gennady B. Sushko +1

This paper presents a detailed computational protocol for atomistic simulation of the formation and growth of metal-containing nanostructures during the Focused Electron Beam Induc…

physics.chem-ph2019★ 19 cited

Reactive molecular dynamics simulations of organometallic compound W(CO)6 fragmentation

Pablo de Vera, Alexey Verkhovtsev, Gennady Sushko +1

Irradiation- and collision-induced fragmentation studies provide information about geometry, electronic properties and interactions between structural units of various molecular sy…

physics.chem-ph2015★ 44 cited

Studying chemical reactions in biological systems with MBN Explorer: implementation of molecular mechanics with dynamical topology

Gennady B. Sushko, Ilia A. Solov'yov, Alexey V. Verkhovtsev +2

The concept of molecular mechanics force field has been widely accepted nowadays for studying various processes in biomolecular systems. In this paper, we suggest a modification fo…

physics.chem-ph2014★ 29 cited

Molecular dynamics study of the stability of a carbon nanotube atop a catalytic nanoparticle

Alexey V. Verkhovtsev, Stefan Schramm, Andrey V. Solov'yov

The stability of a single-walled carbon nanotube placed on top of a catalytic nickel nanoparticle is investigated by means of molecular dynamics simulations. As a case study, we co…